Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.61□□□□□ -1.99
RORAP35398 AC006378.2-201ENST00000623178 2476 ntBASIC2.61□□□□□ -1.99
RORAP35398 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RORAP35398 DEFB108F-201ENST00000344638 222 ntBASIC2.61□□□□□ -1.99
RORAP35398 MIR449A-201ENST00000362113 91 ntBASIC2.61□□□□□ -1.99
RORAP35398 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RORAP35398 RPS3AP24-201ENST00000407896 734 ntBASIC2.61□□□□□ -1.99
RORAP35398 RNU2-52P-201ENST00000410680 190 ntBASIC2.61□□□□□ -1.99
RORAP35398 RNU4-22P-201ENST00000411058 166 ntBASIC2.61□□□□□ -1.99
RORAP35398 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.61□□□□□ -1.99
RORAP35398 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.61□□□□□ -1.99
RORAP35398 RPS29P6-201ENST00000438196 145 ntBASIC2.61□□□□□ -1.99
RORAP35398 MTND4P6-201ENST00000438297 472 ntBASIC2.61□□□□□ -1.99
RORAP35398 THAP5P1-201ENST00000439089 262 ntBASIC2.61□□□□□ -1.99
RORAP35398 SDCBPP1-201ENST00000440192 890 ntBASIC2.61□□□□□ -1.99
RORAP35398 RPL26P6-201ENST00000440913 438 ntBASIC2.61□□□□□ -1.99
RORAP35398 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.61□□□□□ -1.99
RORAP35398 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RORAP35398 FCF1P6-201ENST00000456841 595 ntBASIC2.61□□□□□ -1.99
RORAP35398 RNU7-136P-201ENST00000458819 69 ntBASIC2.61□□□□□ -1.99
RORAP35398 RPL31P60-201ENST00000478450 367 ntBASIC2.61□□□□□ -1.99
RORAP35398 RPL23AP70-201ENST00000483361 460 ntBASIC2.61□□□□□ -1.99
RORAP35398 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.61□□□□□ -1.99
RORAP35398 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.61□□□□□ -1.99
RORAP35398 AC021146.8-201ENST00000507455 733 ntBASIC2.61□□□□□ -1.99
RORAP35398 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.61□□□□□ -1.99
RORAP35398 XKRY-201ENST00000510392 1100 ntBASIC2.61□□□□□ -1.99
RORAP35398 AC118465.1-201ENST00000513820 1271 ntBASIC2.61□□□□□ -1.99
RORAP35398 AC022483.1-201ENST00000514020 567 ntBASIC2.61□□□□□ -1.99
RORAP35398 DEFB108D-201ENST00000527787 222 ntBASIC2.61□□□□□ -1.99
RORAP35398 AC007954.1-201ENST00000554198 494 ntBASIC2.61□□□□□ -1.99
RORAP35398 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.61□□□□□ -1.99
RORAP35398 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.61□□□□□ -1.99
RORAP35398 ZNF861P-201ENST00000588126 639 ntBASIC2.61□□□□□ -1.99
RORAP35398 AC091057.3-201ENST00000602684 733 ntBASIC2.61□□□□□ -1.99
RORAP35398 NRBF2P5-201ENST00000603087 788 ntBASIC2.61□□□□□ -1.99
RORAP35398 AC011330.2-201ENST00000621680 635 ntBASIC2.61□□□□□ -1.99
RORAP35398 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.61□□□□□ -1.99
RORAP35398 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RORAP35398 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.61□□□□□ -1.99
RORAP35398 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.61□□□□□ -1.99
RORAP35398 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RORAP35398 AL022578.1-201ENST00000439330 1433 ntBASIC2.6□□□□□ -1.99
RORAP35398 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RORAP35398 AC005539.1-201ENST00000443768 1479 ntBASIC2.6□□□□□ -1.99
RORAP35398 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RORAP35398 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RORAP35398 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RORAP35398 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RORAP35398 RNU6-859P-201ENST00000362728 107 ntBASIC2.6□□□□□ -1.99
RORAP35398 MIR34A-201ENST00000385130 110 ntBASIC2.6□□□□□ -1.99
RORAP35398 MIR767-201ENST00000390228 109 ntBASIC2.6□□□□□ -1.99
RORAP35398 RNU6-952P-201ENST00000391164 108 ntBASIC2.6□□□□□ -1.99
RORAP35398 AL031679.1-201ENST00000400616 525 ntBASIC2.6□□□□□ -1.99
RORAP35398 ERHP2-201ENST00000402323 299 ntBASIC2.6□□□□□ -1.99
RORAP35398 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RORAP35398 CCDC58P2-201ENST00000417131 366 ntBASIC2.6□□□□□ -1.99
RORAP35398 MTCO2P5-201ENST00000422621 426 ntBASIC2.6□□□□□ -1.99
RORAP35398 AL139421.1-201ENST00000423010 169 ntBASIC2.6□□□□□ -1.99
RORAP35398 USP9YP11-201ENST00000427537 717 ntBASIC2.6□□□□□ -1.99
RORAP35398 AC009296.1-201ENST00000443146 155 ntBASIC2.6□□□□□ -1.99
RORAP35398 ZNF886P-201ENST00000450781 723 ntBASIC2.6□□□□□ -1.99
RORAP35398 AP000705.1-201ENST00000454567 350 ntBASIC2.6□□□□□ -1.99
RORAP35398 MTND2P39-201ENST00000457230 764 ntBASIC2.6□□□□□ -1.99
RORAP35398 snoU13.28-201ENST00000459235 104 ntBASIC2.6□□□□□ -1.99
RORAP35398 KC877373.1-201ENST00000479066 408 ntBASIC2.6□□□□□ -1.99
RORAP35398 RPL30P5-201ENST00000494923 336 ntBASIC2.6□□□□□ -1.99
RORAP35398 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.6□□□□□ -1.99
RORAP35398 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.6□□□□□ -1.99
RORAP35398 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.6□□□□□ -1.99
RORAP35398 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.6□□□□□ -1.99
RORAP35398 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.6□□□□□ -1.99
RORAP35398 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.6□□□□□ -1.99
RORAP35398 AC103783.1-201ENST00000520506 373 ntBASIC2.6□□□□□ -1.99
RORAP35398 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.6□□□□□ -1.99
RORAP35398 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RORAP35398 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.6□□□□□ -1.99
RORAP35398 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.6□□□□□ -1.99
RORAP35398 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.6□□□□□ -1.99
RORAP35398 AC090615.1-201ENST00000577519 154 ntBASIC2.6□□□□□ -1.99
RORAP35398 MIR4298-201ENST00000584380 73 ntBASIC2.6□□□□□ -1.99
RORAP35398 AC105224.1-201ENST00000587055 421 ntBASIC2.6□□□□□ -1.99
RORAP35398 AL160237.3-201ENST00000604114 1013 ntBASIC2.6□□□□□ -1.99
RORAP35398 AP000787.2-201ENST00000604432 568 ntBASIC2.6□□□□□ -1.99
RORAP35398 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.6□□□□□ -1.99
RORAP35398 AC107075.1-201ENST00000613695 314 ntBASIC2.6□□□□□ -1.99
RORAP35398 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.6□□□□□ -1.99
RORAP35398 UCA1.1-201ENST00000620952 75 ntBASIC2.6□□□□□ -1.99
RORAP35398 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.6□□□□□ -1.99
RORAP35398 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RORAP35398 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RORAP35398 MTND4P9-201ENST00000507819 1346 ntBASIC2.6□□□□□ -1.99
RORAP35398 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.59□□□□□ -1.99
RORAP35398 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RORAP35398 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RORAP35398 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RORAP35398 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RORAP35398 RNU6-560P-201ENST00000364007 108 ntBASIC2.59□□□□□ -1.99
RORAP35398 SNORD116.1-201ENST00000365628 92 ntBASIC2.59□□□□□ -1.99
RORAP35398 MIR181B1-201ENST00000385240 110 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms