Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC055876.1-202ENST00000567053 138 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC8P31273 LARP7P3-201ENST00000579888 337 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC8P31273 MIR3611-201ENST00000584484 83 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC8P31273 AC106900.2-201ENST00000604994 317 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 AL139286.2-201ENST00000606838 396 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 AC013562.2-201ENST00000611632 603 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 XIST_intron.1-201ENST00000619444 68 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 PLCE1P1-201ENST00000622094 305 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 AL136164.4-201ENST00000625013 2135 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 SCARNA15.3-201ENST00000626315 122 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 SCARNA4.1-201ENST00000628597 123 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 MIR622-201ENST00000638396 96 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 AC006927.3-201ENST00000638789 384 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC8P31273 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC8P31273 PABPC1P9-201ENST00000426076 1612 ntBASIC3.54□□□□□ -1.84
HOXC8P31273 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC8P31273 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC8P31273 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC8P31273 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HOXC8P31273 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC8P31273 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC8P31273 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC8P31273 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC8P31273 AC091152.2-201ENST00000591628 2569 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 RNU6-97P-201ENST00000363387 104 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC8P31273 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HOXC8P31273 OR5H15-201ENST00000383696 930 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 MIR135A2-201ENST00000384854 100 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 AC083875.1-201ENST00000419509 405 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 RPL27AP8-201ENST00000424277 446 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC8P31273 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC8P31273 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC8P31273 MTND5P14-201ENST00000441481 1267 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 RPL17P49-201ENST00000443728 411 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC8P31273 RPS27AP1-201ENST00000475545 471 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 AC116337.2-201ENST00000477662 156 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 AC096576.1-201ENST00000489014 359 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 CBX3P3-201ENST00000508108 532 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 AC024589.1-201ENST00000512207 263 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC8P31273 NARSP2-201ENST00000518524 679 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC8P31273 COX6CP8-201ENST00000522620 226 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 AC087276.1-201ENST00000529659 480 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC8P31273 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC8P31273 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC8P31273 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC8P31273 AGGF1P4-201ENST00000568249 801 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 UBL5P2-201ENST00000583788 219 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC8P31273 RNU6-88P-201ENST00000606801 100 ntBASIC3.53□□□□□ -1.84
HOXC8P31273 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC8P31273 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC8P31273 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC8P31273 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
HOXC8P31273 MTND4P5-201ENST00000435821 1374 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC8P31273 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HOXC8P31273 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC8P31273 RNU5F-7P-201ENST00000363696 115 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 Y_RNA.234-201ENST00000364409 97 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 MIR320C1-201ENST00000408566 88 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 HMGB3P23-201ENST00000414981 585 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AL031779.1-201ENST00000415663 330 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AL356968.1-201ENST00000416622 474 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 SSXP9-201ENST00000417503 292 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXC8P31273 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC8P31273 AC024082.2-201ENST00000434771 238 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AL512286.1-201ENST00000439244 400 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AL831737.1-201ENST00000441288 271 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC8P31273 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC8P31273 COX6CP12-201ENST00000446748 202 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC8P31273 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC8P31273 RNU7-170P-201ENST00000459303 61 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC8P31273 AL049830.2-201ENST00000480072 201 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AC108860.1-201ENST00000484521 383 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 PCBP2P3-201ENST00000509726 843 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC8P31273 AC022483.1-201ENST00000514020 567 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 MIR2276-201ENST00000516886 89 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AP002404.1-201ENST00000532005 451 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AP000873.5-201ENST00000533906 236 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC8P31273 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC8P31273 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC8P31273 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC8P31273 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC8P31273 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms