Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL135786.1-201ENST00000415892 214 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HOXA9P31269 OR4G11P-201ENST00000492842 939 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 KLRA1P-201ENST00000503499 986 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXA9P31269 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA9P31269 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HOXA9P31269 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA9P31269 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA9P31269 AC005832.3-201ENST00000537929 631 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA9P31269 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA9P31269 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
HOXA9P31269 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA9P31269 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA9P31269 AC009063.1-201ENST00000563342 702 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 AL132657.2-201ENST00000564417 358 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXA9P31269 AC106028.5-201ENST00000610332 395 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 TUG1_1.1-201ENST00000610654 145 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 AL359198.2-201ENST00000611836 194 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 AC120349.2-201ENST00000625002 298 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.66□□□□□ -1.98
HOXA9P31269 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXA9P31269 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA9P31269 AC107982.1-201ENST00000507171 1300 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA9P31269 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA9P31269 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA9P31269 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
HOXA9P31269 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HOXA9P31269 RNU6-216P-201ENST00000363282 104 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 RNU6-560P-201ENST00000364007 108 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 SNORA72.3-201ENST00000365074 132 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AL359511.1-201ENST00000402970 211 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 SSR1P2-201ENST00000415208 787 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA9P31269 MTND2P5-201ENST00000432656 1006 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA9P31269 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AC092155.2-201ENST00000454675 477 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 SETP11-201ENST00000473027 690 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 UBL5P3-201ENST00000475112 231 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 SRIP1-201ENST00000489235 288 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA9P31269 AC110760.3-202ENST00000515177 371 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AC100870.1-201ENST00000522035 505 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AC018630.1-201ENST00000541376 925 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA9P31269 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXA9P31269 AC125611.1-201ENST00000549563 229 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HOXA9P31269 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA9P31269 AP001269.3-201ENST00000588718 329 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA9P31269 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA9P31269 AC107075.1-201ENST00000613695 314 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AC009318.4-201ENST00000620496 486 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXA9P31269 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
HOXA9P31269 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
HOXA9P31269 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HOXA9P31269 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.65□□□□□ -1.99
HOXA9P31269 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
HOXA9P31269 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXA9P31269 AC244517.1-201ENST00000606030 2086 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HOXA9P31269 SNRPEP3-201ENST00000338402 276 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HOXA9P31269 Y_RNA.25-201ENST00000362528 102 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 U8.2-201ENST00000363156 134 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 RNU6-1074P-201ENST00000383995 104 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 MIR506-201ENST00000384998 124 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 USP9YP20-201ENST00000419224 558 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXA9P31269 VN1R10P-201ENST00000447106 875 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC007327.1-201ENST00000447461 264 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC004022.1-201ENST00000447766 1066 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HOXA9P31269 AC234775.1-201ENST00000454247 670 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC092757.1-201ENST00000467293 467 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXA9P31269 AC096751.1-202ENST00000502691 1067 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HOXA9P31269 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXA9P31269 AC093767.1-201ENST00000504523 156 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 ANXA2P1-201ENST00000505539 926 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXA9P31269 AL133271.1-201ENST00000538229 291 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXA9P31269 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXA9P31269 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXA9P31269 BNIP3P26-201ENST00000600827 554 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC021749.1-201ENST00000604322 607 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC105148.1-201ENST00000604961 409 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC007938.3-201ENST00000604965 623 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC106900.2-201ENST00000604994 317 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC069304.2-201ENST00000605154 435 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AL450336.1-201ENST00000605180 586 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms