Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC022483.1-201ENST00000514020 567 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 RNU6-751P-201ENST00000516382 101 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 RNA5SP24-201ENST00000516478 95 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 HMGB1P1-201ENST00000522557 636 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 AP001317.1-201ENST00000531194 960 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 RN7SL622P-201ENST00000585292 275 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC103810.6-201ENST00000606708 136 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC006213.4-201ENST00000616184 634 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC073308.1-201ENST00000623696 305 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 ZNF720P1-201ENST00000562403 1939 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DMBP28068 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DMBP28068 HMGB1P5-201ENST00000255320 642 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 RNA5SP289-201ENST00000362332 137 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 RNA5SP37-201ENST00000365420 130 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 RNU4-27P-201ENST00000410889 139 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AL136133.1-201ENST00000413694 376 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC099548.1-201ENST00000421443 426 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 SFR1P2-201ENST00000421841 730 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC246680.2-201ENST00000422106 389 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 MTATP6P11-201ENST00000428071 670 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 GTF2IP20-201ENST00000431663 360 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 HIGD1AP2-201ENST00000446367 280 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 DPPA3P1-201ENST00000448050 469 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 USP9YP34-201ENST00000453983 808 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC092155.2-201ENST00000454675 477 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 RNU7-140P-201ENST00000459546 60 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC128713.1-201ENST00000471495 306 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 FAM172BP-201ENST00000487497 1089 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 NDUFB4P2-201ENST00000509515 391 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC109329.2-201ENST00000519658 482 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 AP003122.3-201ENST00000526316 255 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 COX6CP5-201ENST00000527162 228 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC011611.5-201ENST00000552477 578 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 LARP7P2-201ENST00000575306 125 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 MIR3616-201ENST00000584070 92 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 MIR4658-201ENST00000584344 65 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC005498.1-201ENST00000592125 465 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 AL671309.1-201ENST00000603750 544 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC107294.1-201ENST00000609524 467 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC093838.1-201ENST00000613014 469 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC064859.1-201ENST00000624741 174 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC080188.3-201ENST00000624842 748 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AC022336.2-201ENST00000568966 2538 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 AL022578.1-201ENST00000439330 1433 ntBASIC1.74□□□□□ -2.13
HLA-DMBP28068 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HLA-DMBP28068 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DMBP28068 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DMBP28068 RN7SKP226-201ENST00000364912 300 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 SNORA67.4-201ENST00000384688 142 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 RNU4-53P-201ENST00000410828 140 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DMBP28068 SPA17P1-201ENST00000416656 452 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 OOSP1P1-201ENST00000423265 274 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DMBP28068 HMGN2P38-201ENST00000423806 265 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 AL356867.1-201ENST00000429623 299 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 AL512844.2-201ENST00000433990 593 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 AC234064.1-201ENST00000436312 247 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 BMI1P1-201ENST00000445879 941 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 AL096803.2-201ENST00000450032 677 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 AL139109.1-201ENST00000455491 297 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 RNU6-775P-201ENST00000459318 96 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 MTND4LP3-201ENST00000468320 276 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMBP28068 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMBP28068 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMBP28068 ATP5F1P5-201ENST00000526403 760 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DMBP28068 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DMBP28068 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMBP28068 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMBP28068 OR4K8P-201ENST00000578842 1048 ntBASIC1.73□□□□□ -2.13
HLA-DMBP28068 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMBP28068 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms