Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.8□□□□□ -1.64
ITGA4P13612 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.8□□□□□ -1.64
ITGA4P13612 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.8□□□□□ -1.64
ITGA4P13612 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.8□□□□□ -1.64
ITGA4P13612 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.8□□□□□ -1.64
ITGA4P13612 AC103710.2-202ENST00000641454 2853 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 NEAT1-202ENST00000501122 22743 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ITGA4P13612 AC116667.1-201ENST00000604855 2072 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ITGA4P13612 RNU1-94P-201ENST00000362627 173 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 SNORA63C-201ENST00000364578 129 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ITGA4P13612 RNU6-701P-201ENST00000384059 107 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 RNU6-1127P-201ENST00000384580 107 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 EIF4E2P1-201ENST00000393781 255 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 RPL37P10-201ENST00000412884 288 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AL139095.3-201ENST00000419672 1203 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 PDSS1P1-201ENST00000422953 1114 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.79□□□□□ -1.64
ITGA4P13612 Z82205.1-201ENST00000428456 297 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.79□□□□□ -1.64
ITGA4P13612 FABP5P13-201ENST00000452144 328 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.79□□□□□ -1.64
ITGA4P13612 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.79□□□□□ -1.64
ITGA4P13612 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.79□□□□□ -1.64
ITGA4P13612 RNU7-152P-201ENST00000458982 64 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC091167.1-201ENST00000492017 396 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ITGA4P13612 RPL39P5-202ENST00000512505 151 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.79□□□□□ -1.64
ITGA4P13612 RN7SKP24-201ENST00000515888 284 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 RNU6-189P-201ENST00000516120 101 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 RNU6-256P-201ENST00000516747 97 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 RNU6-685P-201ENST00000517088 95 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 HMGB1P19-201ENST00000517578 577 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC100770.1-201ENST00000532310 322 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.79□□□□□ -1.64
ITGA4P13612 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.79□□□□□ -1.64
ITGA4P13612 AL161713.1-201ENST00000555538 145 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.79□□□□□ -1.64
ITGA4P13612 RPL23AP84-201ENST00000571193 464 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC006270.2-201ENST00000578523 652 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 MIR3672-201ENST00000584290 82 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.79□□□□□ -1.64
ITGA4P13612 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ITGA4P13612 HMGB2P1-201ENST00000591146 634 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.79□□□□□ -1.64
ITGA4P13612 MIR3653-201ENST00000625572 110 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 AC140479.6-201ENST00000633535 357 ntBASIC4.79□□□□□ -1.64
ITGA4P13612 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ITGA4P13612 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ITGA4P13612 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
ITGA4P13612 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.79□□□□□ -1.64
ITGA4P13612 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
ITGA4P13612 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ITGA4P13612 MTCO1P12-201ENST00000414273 1543 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ITGA4P13612 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.78□□□□□ -1.64
ITGA4P13612 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.78□□□□□ -1.64
ITGA4P13612 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.78□□□□□ -1.64
ITGA4P13612 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ITGA4P13612 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ITGA4P13612 RNU6-1155P-201ENST00000363554 107 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 RNU1-132P-201ENST00000364300 164 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 Y_RNA.445-201ENST00000384168 102 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 SNORA70C-201ENST00000384538 135 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ITGA4P13612 RNA5SP219-201ENST00000390940 113 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 MTCYBP4-201ENST00000401524 249 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 RPS20P14-201ENST00000412545 360 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ITGA4P13612 AC099677.1-201ENST00000420575 175 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.78□□□□□ -1.64
ITGA4P13612 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.78□□□□□ -1.64
ITGA4P13612 CALM2P2-201ENST00000428512 440 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 RPL23AP25-201ENST00000430973 463 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.78□□□□□ -1.64
ITGA4P13612 CYCSP43-201ENST00000438233 310 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.78□□□□□ -1.64
ITGA4P13612 RPL23AP33-201ENST00000442301 452 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.78□□□□□ -1.64
ITGA4P13612 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.78□□□□□ -1.64
ITGA4P13612 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.78□□□□□ -1.64
ITGA4P13612 AC090096.1-201ENST00000489168 390 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 RNU6-1095P-201ENST00000516148 108 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 RNU6-123P-201ENST00000516163 102 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 Y_RNA.711-201ENST00000516993 102 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 RNA5SP454-201ENST00000517231 127 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 AC090151.1-201ENST00000520784 730 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 MRPL49P2-201ENST00000521066 465 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.78□□□□□ -1.64
ITGA4P13612 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.78□□□□□ -1.64
ITGA4P13612 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.78□□□□□ -1.64
ITGA4P13612 DPPA3P3-201ENST00000603842 430 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 AC012409.4-201ENST00000612923 249 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 AC004696.1-201ENST00000614345 607 ntBASIC4.78□□□□□ -1.64
ITGA4P13612 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.78□□□□□ -1.64
ITGA4P13612 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms