Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 AC018638.8-201ENST00000588755 281 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 AC006116.10-201ENST00000591836 581 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 MIR7851-201ENST00000610611 160 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 AL132765.2-201ENST00000610812 351 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOAP06340 BDP1P-201ENST00000582658 1990 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOAP06340 AC114546.3-201ENST00000623582 1734 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOAP06340 AL365440.1-201ENST00000436135 2167 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 RNVU1-3-201ENST00000364313 161 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 Y_RNA.234-201ENST00000364409 97 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 Y_RNA.419-201ENST00000384041 102 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 RNU6-178P-201ENST00000384631 104 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DOAP06340 FAT1P1-201ENST00000406588 507 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 ELOCP4-201ENST00000420090 333 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AL159987.2-201ENST00000432754 307 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 BX276092.4-201ENST00000452056 248 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC055855.1-201ENST00000489563 579 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 HMGB1P21-201ENST00000502313 581 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 TXNP6-201ENST00000510190 310 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 MTCO3P44-201ENST00000510977 541 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC005798.1-201ENST00000513715 387 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC112206.3-201ENST00000514578 389 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 SNORA40.12-201ENST00000516329 111 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC103843.2-201ENST00000530523 682 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AP000907.2-201ENST00000530827 353 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC078814.3-201ENST00000553036 491 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC055876.1-202ENST00000567053 138 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 MIR4716-201ENST00000579628 84 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC015917.1-201ENST00000579654 510 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC007179.3-201ENST00000604976 235 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AL050343.2-201ENST00000607338 280 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC064836.2-201ENST00000609491 462 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC233309.1-201ENST00000619522 751 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DOAP06340 AC138649.5-201ENST00000637456 137 ntBASIC4.31□□□□□ -1.72
HLA-DOAP06340 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DOAP06340 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC007529.1-201ENST00000418574 2178 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DOAP06340 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 FRG1BP-201ENST00000278882 761 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 FRG1CP-201ENST00000358464 769 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 RNU4-79P-201ENST00000362764 141 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 RNU2-15P-201ENST00000410692 191 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 RPL36AP53-201ENST00000432891 316 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 CALM1P1-201ENST00000442082 433 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 RPS4XP10-201ENST00000465034 731 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 PCBP2P3-201ENST00000509726 843 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC021146.1-201ENST00000511202 716 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 RN7SKP209-201ENST00000516888 304 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 OR4P1P-201ENST00000530808 1136 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC243972.3-201ENST00000539655 198 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC023050.3-201ENST00000541142 333 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC010525.2-201ENST00000590920 195 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC012468.1-201ENST00000604888 430 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AL354950.2-201ENST00000617939 290 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 MIR7975-201ENST00000619350 68 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 FRG1KP-201ENST00000623592 341 ntBASIC4.3□□□□□ -1.72
HLA-DOAP06340 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DOAP06340 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DOAP06340 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DOAP06340 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms