Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.62□□□□□ -1.83
ATP2A1O14983 AC012065.4-201ENST00000602445 679 ntBASIC3.62□□□□□ -1.83
ATP2A1O14983 AP001981.2-201ENST00000603241 418 ntBASIC3.62□□□□□ -1.83
ATP2A1O14983 AC006023.2-201ENST00000609916 167 ntBASIC3.62□□□□□ -1.83
ATP2A1O14983 TUG1_1.1-201ENST00000610654 145 ntBASIC3.62□□□□□ -1.83
ATP2A1O14983 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.62□□□□□ -1.83
ATP2A1O14983 AC099506.2-201ENST00000623074 221 ntBASIC3.62□□□□□ -1.83
ATP2A1O14983 AC079597.1-201ENST00000624306 508 ntBASIC3.62□□□□□ -1.83
ATP2A1O14983 AC025048.6-202ENST00000627667 438 ntBASIC3.62□□□□□ -1.83
ATP2A1O14983 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATP2A1O14983 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A1O14983 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
ATP2A1O14983 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A1O14983 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.62□□□□□ -1.83
ATP2A1O14983 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.61□□□□□ -1.83
ATP2A1O14983 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
ATP2A1O14983 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
ATP2A1O14983 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 U3.4-201ENST00000363352 213 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 RNU4-91P-201ENST00000364778 135 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 RNU6-1181P-201ENST00000384191 106 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 Y_RNA.510-201ENST00000384511 114 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 AL359704.1-201ENST00000411586 781 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 RPL35AP12-201ENST00000425362 338 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.61□□□□□ -1.83
ATP2A1O14983 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.61□□□□□ -1.83
ATP2A1O14983 UBE2V1P13-201ENST00000436983 439 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.61□□□□□ -1.83
ATP2A1O14983 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATP2A1O14983 AL136097.1-201ENST00000456945 913 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 AP1S2P1-201ENST00000457344 379 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.61□□□□□ -1.83
ATP2A1O14983 AC010285.1-201ENST00000470580 392 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.61□□□□□ -1.83
ATP2A1O14983 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.61□□□□□ -1.83
ATP2A1O14983 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.61□□□□□ -1.83
ATP2A1O14983 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.61□□□□□ -1.83
ATP2A1O14983 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATP2A1O14983 RNU6-1003P-201ENST00000517099 105 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.61□□□□□ -1.83
ATP2A1O14983 MTND4LP18-201ENST00000526864 291 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.61□□□□□ -1.83
ATP2A1O14983 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.61□□□□□ -1.83
ATP2A1O14983 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 AL353748.2-201ENST00000622148 471 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
ATP2A1O14983 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATP2A1O14983 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.61□□□□□ -1.83
ATP2A1O14983 AC009902.3-201ENST00000606235 2172 ntBASIC3.61□□□□□ -1.83
ATP2A1O14983 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATP2A1O14983 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATP2A1O14983 RNU6-809P-201ENST00000384461 107 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 SNORD15B-201ENST00000384714 146 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 CCDC58P2-201ENST00000417131 366 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 COTL1P1-201ENST00000422309 375 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.6□□□□□ -1.83
ATP2A1O14983 TXNP1-201ENST00000441872 371 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.6□□□□□ -1.83
ATP2A1O14983 TAF9P1-201ENST00000445421 515 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 TAF9P2-201ENST00000454958 515 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 SNRPGP9-201ENST00000456025 225 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 SNRPFP4-201ENST00000456366 242 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 MTCO1P42-201ENST00000457379 726 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 AL049830.2-201ENST00000480072 201 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.6□□□□□ -1.83
ATP2A1O14983 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.6□□□□□ -1.83
ATP2A1O14983 Y_RNA.695-201ENST00000516715 107 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 AC109635.4-202ENST00000531666 412 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.6□□□□□ -1.83
ATP2A1O14983 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.6□□□□□ -1.83
ATP2A1O14983 H3F3AP1-201ENST00000559984 334 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 MIR3186-201ENST00000577404 85 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 MIR5047-201ENST00000579212 100 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.6□□□□□ -1.83
ATP2A1O14983 UBE2L4-201ENST00000587688 464 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 AL033523.1-201ENST00000605153 153 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 AC025594.3-201ENST00000613068 790 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 AL158801.5-201ENST00000623123 465 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 AC011460.1-201ENST00000636268 1834 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATP2A1O14983 AC007496.3-201ENST00000624987 3443 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
ATP2A1O14983 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
ATP2A1O14983 AP001350.1-201ENST00000601906 1524 ntBASIC3.6□□□□□ -1.83
ATP2A1O14983 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ATP2A1O14983 AC007256.1-201ENST00000392253 2765 ntBASIC3.59□□□□□ -1.83
ATP2A1O14983 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.59□□□□□ -1.83
ATP2A1O14983 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ATP2A1O14983 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
ATP2A1O14983 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ATP2A1O14983 FRG1BP-201ENST00000278882 761 ntBASIC3.59□□□□□ -1.83
ATP2A1O14983 RNA5SP295-201ENST00000362655 121 ntBASIC3.59□□□□□ -1.83
ATP2A1O14983 RNU5E-5P-201ENST00000365379 116 ntBASIC3.59□□□□□ -1.83
ATP2A1O14983 RNU2-71P-201ENST00000411395 189 ntBASIC3.59□□□□□ -1.83
ATP2A1O14983 RPS7P13-201ENST00000413955 498 ntBASIC3.59□□□□□ -1.83
ATP2A1O14983 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.59□□□□□ -1.83
ATP2A1O14983 BX679664.1-201ENST00000434429 253 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms