Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MIR7515-201ENST00000637837 67 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AC006026.1-201ENST00000444025 1803 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 RNU6-185P-201ENST00000384421 107 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 USP9YP6-201ENST00000413550 854 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 SEPT2P1-201ENST00000419651 180 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AL358075.3-201ENST00000426289 226 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 HSPE1P21-201ENST00000438283 308 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AL357134.1-201ENST00000445848 426 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AC005297.2-201ENST00000450430 606 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 RPL30P9-201ENST00000465586 330 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AC007229.1-201ENST00000590455 412 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 MIR502-201ENST00000606349 86 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 AC005296.1-201ENST00000616145 209 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 MTND4P23-201ENST00000447723 1363 ntBASIC1.41□□□□□ -2.18
AP4S1Q9Y587 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
AP4S1Q9Y587 NUP58P1-201ENST00000502546 1738 ntBASIC1.4□□□□□ -2.18
AP4S1Q9Y587 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
AP4S1Q9Y587 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 MT-TC-201ENST00000387405 66 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 U3.29-201ENST00000391296 212 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AL122016.1-201ENST00000403365 367 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 SNORA3.2-201ENST00000408221 125 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AC105402.1-201ENST00000413336 545 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 RPS3AP9-201ENST00000417027 792 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 HMGB1P26-201ENST00000452520 628 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AC011352.3-201ENST00000505162 593 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 RNU6-250P-201ENST00000516958 103 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AC128687.1-201ENST00000605304 619 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 AC097372.4-201ENST00000625025 466 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.4□□□□□ -2.19
AP4S1Q9Y587 DDX10P1-201ENST00000448545 1933 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 ELF2P3-201ENST00000445099 1506 ntBASIC1.4□□□□□ -2.19
AP4S1Q9Y587 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 RNA5SP27-201ENST00000363839 119 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 MIR767-201ENST00000390228 109 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 RPS3AP44-201ENST00000425466 790 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 Z80107.1-201ENST00000436830 412 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AC004383.1-201ENST00000438135 289 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 MTCYBP3-201ENST00000445588 1137 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AL034418.1-201ENST00000448675 860 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AMD1P1-201ENST00000457220 922 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AC087588.1-201ENST00000462203 316 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 MTCYBP35-201ENST00000503630 1137 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AC022447.3-201ENST00000506865 495 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AC087276.1-201ENST00000529659 480 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 RANP3-201ENST00000530970 276 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.39□□□□□ -2.19
AP4S1Q9Y587 ZNF92P3-201ENST00000596594 954 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 MIR8081-201ENST00000611533 95 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AC110994.2-201ENST00000635481 492 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 MKKS-204ENST00000639674 192 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 AC131280.1-202ENST00000624067 4211 ntBASIC1.39□□□□□ -2.19
AP4S1Q9Y587 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 RNU6-1249P-201ENST00000363237 111 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 RNU6-253P-201ENST00000384730 105 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 CISD1P1-201ENST00000393907 327 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 SNORA11.1-201ENST00000408133 129 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 RPL7L1P10-201ENST00000427790 463 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 SSXP1-201ENST00000453640 473 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 snoU13.28-201ENST00000459235 104 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AC104689.1-201ENST00000473356 768 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms