Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 RPL31P61-201ENST00000496160 376 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC116562.3-201ENST00000506136 177 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 RN7SKP13-201ENST00000515933 244 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 SNORD27.1-201ENST00000516319 72 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 RNU6-314P-201ENST00000516574 104 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC068587.5-201ENST00000528506 175 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 OR4R1P-201ENST00000529879 463 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC136619.2-201ENST00000563361 631 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC104763.2-201ENST00000604179 382 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC007363.1-201ENST00000604736 620 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 MIR92B-201ENST00000607575 96 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AL365204.3-201ENST00000612448 685 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AL589994.2-201ENST00000621124 579 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 CR381653.2-201ENST00000624041 768 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 AC002546.1-201ENST00000588041 2504 ntBASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
LSM4Q9Y4Z0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 RNU6-946P-201ENST00000383878 107 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 Y_RNA.481-201ENST00000384373 102 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 RNU6-14P-201ENST00000384630 106 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 MIR1-2-201ENST00000384961 85 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 CALM2P3-201ENST00000400429 449 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 RPS4XP8-201ENST00000402039 771 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC114491.1-201ENST00000416095 246 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 BX842559.1-201ENST00000419615 532 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC245054.1-201ENST00000420944 258 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC093106.2-201ENST00000428212 385 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 TAAR7P-201ENST00000436141 242 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AF228730.2-201ENST00000438784 848 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 RPS15AP9-201ENST00000439856 381 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC092473.1-201ENST00000441098 221 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AL512326.1-201ENST00000443050 721 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC009237.8-201ENST00000445492 379 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 CBWD4P-201ENST00000445695 655 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC013267.1-201ENST00000458227 267 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 SNRPGP3-201ENST00000469405 227 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 RPS23P3-201ENST00000470993 430 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 RPS20P22-201ENST00000473700 357 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC126182.1-201ENST00000478134 357 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC108475.1-201ENST00000507880 950 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC009646.1-201ENST00000510455 318 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 RNU6-1256P-201ENST00000516539 103 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 TRAV8-5-201ENST00000537369 341 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 HMGB1P6-201ENST00000569046 646 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC006130.2-201ENST00000586202 326 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC067852.3-201ENST00000589177 561 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC002545.1-201ENST00000592511 181 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 DPPA3P3-201ENST00000603842 430 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC013553.2-201ENST00000604244 589 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC245389.1-201ENST00000605141 529 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 AC092954.2-201ENST00000609103 430 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 MIR8059-201ENST00000620427 81 ntBASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
LSM4Q9Y4Z0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM4Q9Y4Z0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM4Q9Y4Z0 AC106871.1-201ENST00000568324 3102 ntBASIC3.29□□□□□ -1.88
LSM4Q9Y4Z0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms