Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AC092436.1-201ENST00000506450 503 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 PTP4A1P4-201ENST00000512479 322 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC093303.1-201ENST00000514549 295 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RN7SKP219-201ENST00000516825 296 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-1088P-201ENST00000516850 104 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AP001804.3-201ENST00000525146 880 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AP005435.4-201ENST00000529514 284 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 PTP4A1P6-201ENST00000531034 478 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 LSM6P2-201ENST00000552208 177 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 PARP1P2-201ENST00000556806 195 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC110743.1-201ENST00000584870 478 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 XIAPP1-201ENST00000603162 600 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AL022345.1-201ENST00000607292 135 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC103858.2-201ENST00000621471 543 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AL450326.2-201ENST00000421913 1962 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC004972.1-201ENST00000623934 2209 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 OR1S2-201ENST00000302592 978 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 Y_RNA.100-201ENST00000363141 102 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 RNY3P13-201ENST00000365542 102 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-178P-201ENST00000384631 104 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-903P-201ENST00000391270 109 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 MIR548F5-201ENST00000408421 86 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 RPL31P45-201ENST00000419532 356 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC011998.1-201ENST00000433403 117 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 HMGB1P15-201ENST00000453854 435 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC083904.1-201ENST00000487828 231 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 TXNP6-201ENST00000510190 310 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC063950.1-201ENST00000552036 308 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AL118558.2-201ENST00000556294 238 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC060771.1-201ENST00000582031 164 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC010680.4-201ENST00000605334 543 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC004908.2-201ENST00000609090 574 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AL159972.1-201ENST00000625150 448 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC119674.1-207ENST00000641355 633 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 AC025031.4-201ENST00000621248 3271 ntBASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PACSIN3Q9UKS6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-1318P-201ENST00000365389 103 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-1106P-201ENST00000390845 107 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AL592114.1-201ENST00000403842 483 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 RNU4-25P-201ENST00000410569 230 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-370P-201ENST00000411008 104 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AL356387.2-201ENST00000422272 243 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AL391219.1-201ENST00000422570 483 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 NUP35P1-201ENST00000422734 947 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 RPL7AP25-201ENST00000423357 805 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AL732292.1-201ENST00000426692 226 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AC137499.1-201ENST00000427602 88 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 MTATP6P16-201ENST00000434543 526 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AL353597.2-202ENST00000434901 373 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 TIMM9P1-201ENST00000436122 256 ntBASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.04□□□□□ -1.76
PACSIN3Q9UKS6 MTCO1P29-201ENST00000496868 288 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms