Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AL139095.3-201ENST00000419672 1203 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 AC079168.2-201ENST00000453977 416 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 RPL7AP28-201ENST00000464513 571 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 HMGB1P30-201ENST00000492455 606 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 RPL23AP55-201ENST00000498163 452 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 HMGB1P21-201ENST00000502313 581 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AC116655.1-201ENST00000508324 901 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 Y_RNA.721-201ENST00000517207 102 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EBF1Q9UH73 AP005902.1-201ENST00000521358 186 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 GNAI2P1-201ENST00000541815 315 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 AC007224.1-201ENST00000564410 144 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 MIR3939-201ENST00000582614 106 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 MIR4293-201ENST00000584305 78 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 BNIP3P16-201ENST00000589779 534 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AC073539.2-201ENST00000597113 165 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AL670379.6-201ENST00000603753 252 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 NUTF2P8-201ENST00000604593 363 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AC008162.1-201ENST00000604718 254 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AL670379.1-201ENST00000604752 252 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AL670379.5-201ENST00000605253 252 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AL670379.8-201ENST00000605353 252 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AL670379.7-201ENST00000605823 252 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AC100812.1-201ENST00000607622 580 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 U2.17-201ENST00000611454 95 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 AL355365.1-201ENST00000616480 294 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 NEAT1-202ENST00000501122 22743 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
EBF1Q9UH73 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EBF1Q9UH73 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EBF1Q9UH73 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EBF1Q9UH73 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EBF1Q9UH73 AC009229.4-201ENST00000623854 1947 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF1Q9UH73 MUC2-202ENST00000613187 4845 ntBASIC4.74□□□□□ -1.65
EBF1Q9UH73 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF1Q9UH73 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF1Q9UH73 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF1Q9UH73 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EBF1Q9UH73 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF1Q9UH73 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF1Q9UH73 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EBF1Q9UH73 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 SNORA71.2-201ENST00000364941 134 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 RNU1-115P-201ENST00000365329 160 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 SET-203ENST00000372688 801 ntTSL 2 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 RNY1P14-201ENST00000384426 108 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 RNA5SP219-201ENST00000390940 113 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC092162.1-201ENST00000432828 434 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AL591212.2-201ENST00000433923 257 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 RPS15AP27-201ENST00000449183 343 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC243772.1-201ENST00000451620 410 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 RPL23AP24-201ENST00000458203 385 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC010655.3-201ENST00000478818 450 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC092451.1-201ENST00000480211 153 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 DEFB109F-201ENST00000491870 277 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC073073.1-201ENST00000493920 463 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC108078.2-201ENST00000510750 236 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC021146.3-201ENST00000511911 260 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 Y_RNA.661-201ENST00000516003 99 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 RNU6-685P-201ENST00000517088 95 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 RNU1-54P-201ENST00000517181 120 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC123786.2-201ENST00000603459 275 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AL354984.3-201ENST00000604803 325 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 AC074140.1-201ENST00000621617 208 ntBASIC4.73□□□□□ -1.65
EBF1Q9UH73 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EBF1Q9UH73 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF1Q9UH73 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.73□□□□□ -1.65
EBF1Q9UH73 OR14L1P-202ENST00000641545 3009 ntBASIC4.72□□□□□ -1.65
EBF1Q9UH73 AC009643.2-201ENST00000603543 1448 ntBASIC4.72□□□□□ -1.65
EBF1Q9UH73 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.72□□□□□ -1.65
EBF1Q9UH73 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
EBF1Q9UH73 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
EBF1Q9UH73 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
EBF1Q9UH73 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms