Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
NDE1Q9NXR1 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
NDE1Q9NXR1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 OR8R1P-201ENST00000543943 764 ntBASIC3.07□□□□□ -1.92
NDE1Q9NXR1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 MIR5685-201ENST00000579080 79 ntBASIC3.07□□□□□ -1.92
NDE1Q9NXR1 AC012669.1-201ENST00000603209 283 ntBASIC3.07□□□□□ -1.92
NDE1Q9NXR1 AL590099.1-201ENST00000615276 138 ntBASIC3.07□□□□□ -1.92
NDE1Q9NXR1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.07□□□□□ -1.92
NDE1Q9NXR1 RNU6-97P-201ENST00000363387 104 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 RNA5SP283-201ENST00000365604 119 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 SNORA75-201ENST00000384158 137 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 SNORD116-4-201ENST00000384733 96 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 MIR670-201ENST00000390142 98 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 CCNG1P1-201ENST00000406783 885 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC006548.1-201ENST00000427470 102 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 USP9YP12-201ENST00000450481 570 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 RNA5SP269-201ENST00000459032 137 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 RPS26P21-201ENST00000475397 348 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 RPL7P23-201ENST00000493874 747 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AP002812.1-201ENST00000495378 474 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC079140.3-201ENST00000511111 550 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 MTND3P5-201ENST00000512798 333 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC126177.3-201ENST00000551839 688 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 ZNF519P3-201ENST00000557158 1032 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC092125.1-201ENST00000562568 1995 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AGGF1P4-201ENST00000568249 801 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC090616.5-202ENST00000582111 297 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 TPMTP1-201ENST00000592307 737 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC015871.2-201ENST00000603605 948 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 SEPT7P9-203ENST00000604116 343 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC087752.4-201ENST00000605911 462 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AL139286.2-201ENST00000606838 396 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 U3.45-201ENST00000607547 219 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AP000254.1-201ENST00000609934 520 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 HULC.1-201ENST00000612720 240 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AC009509.4-201ENST00000619202 509 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 CR381572.1-201ENST00000625098 102 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 LRRC77P-213ENST00000637727 880 ntBASIC3.06□□□□□ -1.92
NDE1Q9NXR1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NDE1Q9NXR1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC092447.10-201ENST00000620607 1652 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 RPS20P2-201ENST00000402520 389 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 RNU2-71P-201ENST00000411395 189 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AL035423.1-201ENST00000420331 213 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC006946.1-201ENST00000429106 328 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 EZH2P1-201ENST00000431167 291 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AL031667.1-201ENST00000440222 725 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 TPT1P7-201ENST00000458300 517 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 ACTR3P3-201ENST00000480448 893 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC034222.1-201ENST00000494052 532 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC017037.2-201ENST00000513850 890 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 MTCYBP41-201ENST00000528913 1123 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms