Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SNORA31.3-201ENST00000516029 96 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 RNA5SP473-201ENST00000516402 125 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 HSBP1P1-201ENST00000555205 166 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AC084783.1-201ENST00000565846 910 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 Z98751.3-201ENST00000604447 521 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AC109309.2-201ENST00000612597 332 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSU72Q9NP77 PHKBP1-201ENST00000450951 1951 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSU72Q9NP77 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSU72Q9NP77 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSU72Q9NP77 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSU72Q9NP77 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSU72Q9NP77 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 RNU1-108P-201ENST00000362556 161 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 RNU1-94P-201ENST00000362627 173 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 RNU6-293P-201ENST00000411259 106 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 PPP1R11P2-201ENST00000423543 382 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 AP000281.1-201ENST00000444036 316 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 AC008264.1-201ENST00000447612 367 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 RPL21P41-201ENST00000459863 264 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 RNU6-390P-201ENST00000516259 103 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 RNA5SP43-201ENST00000516559 110 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 RNU6-307P-201ENST00000516743 106 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 RN7SKP82-201ENST00000516786 223 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 Y_RNA.715-201ENST00000517082 110 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 MIR4271-201ENST00000582451 67 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 MIR5188-201ENST00000583467 113 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 HMGB2P1-201ENST00000591146 634 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 AC138627.2-201ENST00000624202 601 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSU72Q9NP77 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.8□□□□□ -1.64
SSU72Q9NP77 ZNF72P-201ENST00000425869 1908 ntBASIC4.8□□□□□ -1.64
SSU72Q9NP77 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSU72Q9NP77 ZFRP1-201ENST00000457579 2970 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSU72Q9NP77 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSU72Q9NP77 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 Y_RNA.26-201ENST00000362539 101 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 RNU6-1155P-201ENST00000363554 107 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 Y_RNA.214-201ENST00000364201 112 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 RN7SKP187-201ENST00000365536 330 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 RNU6-174P-201ENST00000410406 106 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 TBCAP2-201ENST00000416175 326 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 SSXP9-201ENST00000417503 292 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 BX276092.3-201ENST00000424182 230 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 ELOCP18-201ENST00000434209 337 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC073063.1-201ENST00000434352 607 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC073587.1-201ENST00000447093 876 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 SNORD127-201ENST00000458892 86 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 RNU6-1132P-201ENST00000459214 107 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 RNU7-138P-201ENST00000459479 64 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC008571.1-201ENST00000467232 300 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC022447.4-201ENST00000504053 364 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 COX6B1P5-201ENST00000509843 249 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 RNU6-1095P-201ENST00000516148 108 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 RNU6-677P-201ENST00000516914 101 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC022404.1-201ENST00000555320 273 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC109446.1-201ENST00000566172 220 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 MIR4716-201ENST00000579628 84 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC093227.2-201ENST00000589357 285 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms