Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC9.32□□□□□ -0.92
SCAF1Q9H7N4 RNU6-969P-201ENST00000383900 105 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 RNY1P7-201ENST00000384743 110 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 MIR487A-201ENST00000385009 80 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 MIR10A-201ENST00000385043 110 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 MIR92A2-201ENST00000385299 75 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC138623.1-201ENST00000418060 216 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AL158156.1-201ENST00000422509 473 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 GSTM5P1-201ENST00000434751 660 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AL590399.4-201ENST00000436561 601 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 RPL39P29-201ENST00000447779 157 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC018645.1-201ENST00000505003 109 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC114781.3-201ENST00000512083 142 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 FAM27E2-201ENST00000619668 403 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 Y_RNA.329-201ENST00000365209 107 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 MIR130B-202ENST00000385018 82 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 MIR450A2-201ENST00000385022 100 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 KNOP1P3-201ENST00000446933 426 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 RNA5SP471-201ENST00000516971 106 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC007494.1-201ENST00000562293 760 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AL589674.2-201ENST00000604304 337 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AL391261.4-201ENST00000616012 481 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 AC134878.1-201ENST00000619901 243 ntBASIC9.31□□□□□ -0.92
SCAF1Q9H7N4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 SNORA26.5-201ENST00000391215 123 ntBASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 ELOCP21-201ENST00000412558 336 ntBASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 AL590399.6-201ENST00000446396 307 ntBASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 AL133244.1-201ENST00000456007 258 ntBASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 RNU6-625P-201ENST00000459412 107 ntBASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 FTH1P11-201ENST00000517577 551 ntBASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC9.3□□□□□ -0.92
SCAF1Q9H7N4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 PWAR1-201ENST00000624188 2414 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 AP001284.1-201ENST00000528393 2118 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 Y_RNA.328-201ENST00000365208 113 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 RNU6-1074P-201ENST00000383995 104 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 SPTLC1P2-201ENST00000407089 121 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 RNU6-1218P-201ENST00000458990 108 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 RPL21P6-201ENST00000479171 504 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 AC092824.1-201ENST00000483524 576 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 AL078604.3-201ENST00000615580 211 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 MIR6864-201ENST00000617935 70 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 AL354718.1-201ENST00000619764 589 ntBASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
SCAF1Q9H7N4 AC090971.4-201ENST00000560291 1800 ntBASIC9.28□□□□□ -0.92
SCAF1Q9H7N4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SCAF1Q9H7N4 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms