Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC026422.1-201ENST00000623961 452 ntBASIC3.01□□□□□ -1.93
DDX47Q9H0S4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
DDX47Q9H0S4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
DDX47Q9H0S4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
DDX47Q9H0S4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
DDX47Q9H0S4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
DDX47Q9H0S4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3□□□□□ -1.93
DDX47Q9H0S4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3□□□□□ -1.93
DDX47Q9H0S4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3□□□□□ -1.93
DDX47Q9H0S4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
DDX47Q9H0S4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
DDX47Q9H0S4 RNU6-270P-201ENST00000364131 105 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 RNU6-853P-201ENST00000364306 107 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 SNORA23-201ENST00000365128 182 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 MIR512-1-201ENST00000384913 84 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 U3.20-201ENST00000390909 217 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 SAR1AP4-201ENST00000429225 591 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3□□□□□ -1.93
DDX47Q9H0S4 AC093156.1-201ENST00000440382 670 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3□□□□□ -1.93
DDX47Q9H0S4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3□□□□□ -1.93
DDX47Q9H0S4 ATG12P2-201ENST00000456830 416 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 RNU6-420P-201ENST00000458780 107 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 RPL23AP11-201ENST00000475260 469 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3□□□□□ -1.93
DDX47Q9H0S4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3□□□□□ -1.93
DDX47Q9H0S4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3□□□□□ -1.93
DDX47Q9H0S4 AC093809.1-201ENST00000509155 340 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
DDX47Q9H0S4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3□□□□□ -1.93
DDX47Q9H0S4 RNU6-928P-201ENST00000516876 104 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 RN7SKP272-201ENST00000516988 232 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 MTND2P32-201ENST00000521584 1038 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3□□□□□ -1.93
DDX47Q9H0S4 AC087465.1-201ENST00000560574 245 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3□□□□□ -1.93
DDX47Q9H0S4 MIR5680-201ENST00000577577 84 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 AL391001.1-201ENST00000602747 715 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 AC007179.3-201ENST00000604976 235 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 AC019226.1-201ENST00000625666 515 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
DDX47Q9H0S4 AC099063.3-201ENST00000642066 185 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 AP003122.5-201ENST00000527668 3766 ntBASIC3□□□□□ -1.93
DDX47Q9H0S4 DDX10P1-201ENST00000448545 1933 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 FAM133CP-201ENST00000332869 704 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AL672167.1-206ENST00000356293 943 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 RNU1-39P-201ENST00000383897 165 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 RNU6-754P-201ENST00000391166 107 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 RN7SKP266-201ENST00000410232 287 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 RN7SKP220-201ENST00000410611 288 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 MTCO1P17-201ENST00000411522 491 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 MTND1P21-201ENST00000412991 285 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 SPA17P1-201ENST00000416656 452 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC005326.1-201ENST00000429197 123 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AL512844.2-201ENST00000433990 593 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 UBE2V1P13-201ENST00000436983 439 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 snoU13.22-201ENST00000459428 104 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 RN7SL807P-201ENST00000470923 297 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC103975.1-201ENST00000482506 483 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 RN7SL297P-201ENST00000483161 293 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 LARP1BP2-201ENST00000486594 519 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 HSPD1P15-201ENST00000505573 1122 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 RNU6-840P-201ENST00000517275 65 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 UBTFL10-201ENST00000528532 562 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AL133271.1-201ENST00000538229 291 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC079089.3-201ENST00000603094 673 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 RNU6-88P-201ENST00000606801 100 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC027449.1-201ENST00000608890 407 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC103710.4-201ENST00000609301 899 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 MIR7112-201ENST00000616126 65 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC009902.3-201ENST00000606235 2172 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AL138713.1-201ENST00000624026 2130 ntBASIC2.99□□□□□ -1.93
DDX47Q9H0S4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.98□□□□□ -1.93
DDX47Q9H0S4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
DDX47Q9H0S4 ZNF876P-202ENST00000398732 1485 ntBASIC2.98□□□□□ -1.93
DDX47Q9H0S4 AL049641.1-201ENST00000441055 1948 ntBASIC2.98□□□□□ -1.93
DDX47Q9H0S4 AC007785.2-201ENST00000598627 1916 ntBASIC2.98□□□□□ -1.93
DDX47Q9H0S4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
DDX47Q9H0S4 MIR208A-201ENST00000362287 71 ntBASIC2.98□□□□□ -1.93
DDX47Q9H0S4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.98□□□□□ -1.93
DDX47Q9H0S4 AL590084.2-201ENST00000401481 382 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms