Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CTDSP1Q9GZU7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.35□□□□□ -1.87
CTDSP1Q9GZU7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.35□□□□□ -1.87
CTDSP1Q9GZU7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 RNU6-1090P-201ENST00000364065 94 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 Y_RNA.256-201ENST00000364594 104 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 RNU6-217P-201ENST00000384164 104 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 Y_RNA.453-201ENST00000384223 109 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 MIR325-201ENST00000385260 98 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 RNU6-550P-201ENST00000391057 101 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 HMGN2P8-201ENST00000391458 268 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AL031985.1-201ENST00000392713 418 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 RPS20P14-201ENST00000412545 360 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 RPL30P2-201ENST00000414021 291 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 SNRPFP1-201ENST00000414761 252 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 GPM6BP2-201ENST00000432046 144 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 GPM6BP1-201ENST00000446387 144 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AL118520.1-201ENST00000450770 291 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC012671.1-201ENST00000451912 203 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 SETP20-201ENST00000457046 852 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 RPL21P8-201ENST00000465083 535 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 RNU6-143P-201ENST00000516942 93 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 IGKV2-38-201ENST00000517443 247 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AMZ2P1-203ENST00000565833 850 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AL138889.2-201ENST00000603883 242 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AL158032.1-201ENST00000605401 106 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 MIR15A-201ENST00000607334 83 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC104458.1-201ENST00000608243 463 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC007014.2-201ENST00000615581 479 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 YWHAEP7-203ENST00000622054 312 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC109780.1-201ENST00000451768 1344 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AL442639.1-201ENST00000625030 1899 ntBASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDSP1Q9GZU7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CTDSP1Q9GZU7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CTDSP1Q9GZU7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 RNU6-552P-201ENST00000362869 119 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 RNU1-18P-201ENST00000363062 164 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 Y_RNA.248-201ENST00000364501 109 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 MIR301A-201ENST00000385261 86 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 SNORD66.1-201ENST00000391230 76 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 RNU6-903P-201ENST00000391270 109 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 U3.30-201ENST00000391308 210 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 RN7SKP267-201ENST00000410381 285 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 SNRPEP10-201ENST00000420249 274 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 MTCYBP8-201ENST00000422855 651 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AC012498.1-201ENST00000424037 437 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 ZNF863P-201ENST00000426746 417 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AL592045.1-201ENST00000429867 352 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 CALM1P1-201ENST00000442082 433 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 RPL34P20-201ENST00000442771 351 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 ANP32BP2-201ENST00000454525 545 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 TRBV1-201ENST00000476502 284 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 RPS15AP34-201ENST00000487776 387 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 SNORA70.14-201ENST00000516205 110 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 IGKV3D-34-201ENST00000522638 302 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AC011602.1-201ENST00000546484 331 ntBASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.33□□□□□ -1.88
CTDSP1Q9GZU7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms