Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.25□□□□□ -1.89
CDCA3Q99618 ROCK1P1-201ENST00000573767 549 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC099489.2-201ENST00000574976 260 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AP001004.1-201ENST00000582468 324 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.25□□□□□ -1.89
CDCA3Q99618 AL590282.1-201ENST00000610379 1136 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC068057.2-201ENST00000624047 895 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 AC006927.3-201ENST00000638789 384 ntBASIC3.25□□□□□ -1.89
CDCA3Q99618 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CDCA3Q99618 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.25□□□□□ -1.89
CDCA3Q99618 AC092447.10-201ENST00000620607 1652 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDCA3Q99618 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDCA3Q99618 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDCA3Q99618 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CDCA3Q99618 MIR135A2-201ENST00000384854 100 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 TPMTP3-201ENST00000411928 735 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.24□□□□□ -1.89
CDCA3Q99618 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.24□□□□□ -1.89
CDCA3Q99618 AC009518.2-201ENST00000418056 731 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 AL137014.1-201ENST00000420490 1226 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.24□□□□□ -1.89
CDCA3Q99618 BEND7P1-201ENST00000422058 457 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 VDAC1P3-201ENST00000434069 851 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 RSU1P2-202ENST00000437884 485 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.24□□□□□ -1.89
CDCA3Q99618 AC105272.1-201ENST00000438604 198 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 AL512286.1-201ENST00000439244 400 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.24□□□□□ -1.89
CDCA3Q99618 MTND3P7-201ENST00000474435 343 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.24□□□□□ -1.89
CDCA3Q99618 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.24□□□□□ -1.89
CDCA3Q99618 AC010486.3-201ENST00000511602 785 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.24□□□□□ -1.89
CDCA3Q99618 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.24□□□□□ -1.89
CDCA3Q99618 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.24□□□□□ -1.89
CDCA3Q99618 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.24□□□□□ -1.89
CDCA3Q99618 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.24□□□□□ -1.89
CDCA3Q99618 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.24□□□□□ -1.89
CDCA3Q99618 MIR4738-201ENST00000579134 87 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.24□□□□□ -1.89
CDCA3Q99618 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
CDCA3Q99618 AC011451.2-201ENST00000604303 598 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 TUG1_1.1-201ENST00000610654 145 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 AC002550.2-201ENST00000621246 394 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 AC048347.1-201ENST00000624621 427 ntBASIC3.24□□□□□ -1.89
CDCA3Q99618 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CDCA3Q99618 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CDCA3Q99618 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDCA3Q99618 AL136360.1-201ENST00000503377 1900 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDCA3Q99618 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDCA3Q99618 FRG1BP-201ENST00000278882 761 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 RNU6-1155P-201ENST00000363554 107 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 SNORA51.2-201ENST00000364595 132 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 MIR184-201ENST00000384962 84 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 SNORA48.8-201ENST00000391324 134 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDCA3Q99618 RPL7P8-201ENST00000411964 730 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AC109780.2-201ENST00000413467 845 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 RPL31P12-201ENST00000422587 358 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.23□□□□□ -1.89
CDCA3Q99618 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.23□□□□□ -1.89
CDCA3Q99618 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.23□□□□□ -1.89
CDCA3Q99618 RPS24P13-201ENST00000442520 397 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.23□□□□□ -1.89
CDCA3Q99618 KATNBL1P6-201ENST00000453433 915 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.23□□□□□ -1.89
CDCA3Q99618 RPS29P26-201ENST00000477483 171 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AC021205.2-201ENST00000480069 347 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AC021382.1-201ENST00000483523 359 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AC034222.1-201ENST00000494052 532 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 MLLT10P2-201ENST00000506434 249 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 KLHL2P1-201ENST00000508691 521 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 PCMTD1P2-201ENST00000565017 355 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.23□□□□□ -1.89
CDCA3Q99618 SNORD84-203ENST00000584275 78 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.23□□□□□ -1.89
CDCA3Q99618 AC104984.5-201ENST00000586878 94 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.23□□□□□ -1.89
CDCA3Q99618 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDCA3Q99618 AC013444.2-201ENST00000603317 787 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AC121247.2-201ENST00000604776 136 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AC008443.7-201ENST00000622195 246 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.23□□□□□ -1.89
CDCA3Q99618 MIR3974-201ENST00000637126 96 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 MIR7153-201ENST00000637758 57 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.23□□□□□ -1.89
CDCA3Q99618 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDCA3Q99618 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.23□□□□□ -1.89
CDCA3Q99618 AL445523.1-201ENST00000451184 1362 ntBASIC3.23□□□□□ -1.89
CDCA3Q99618 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDCA3Q99618 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDCA3Q99618 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDCA3Q99618 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDCA3Q99618 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDCA3Q99618 RNU6-359P-201ENST00000365466 108 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 RNU6-769P-201ENST00000384407 104 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms