Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AP001804.3-201ENST00000525146 880 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.92□□□□□ -1.62
BRF1Q92994 DEFB108D-201ENST00000527787 222 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.92□□□□□ -1.62
BRF1Q92994 AL137161.1-201ENST00000532231 390 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.92□□□□□ -1.62
BRF1Q92994 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRF1Q92994 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRF1Q92994 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.92□□□□□ -1.62
BRF1Q92994 FRG2DP-202ENST00000566967 323 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 MIR4700-201ENST00000578311 74 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AC067852.4-201ENST00000590314 478 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.92□□□□□ -1.62
BRF1Q92994 AL592436.1-201ENST00000605135 558 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRF1Q92994 AC015813.4-201ENST00000610469 179 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AC025034.2-201ENST00000623264 286 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.92□□□□□ -1.62
BRF1Q92994 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRF1Q92994 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
BRF1Q92994 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
BRF1Q92994 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.92□□□□□ -1.62
BRF1Q92994 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRF1Q92994 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.92□□□□□ -1.62
BRF1Q92994 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
BRF1Q92994 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.91□□□□□ -1.62
BRF1Q92994 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
BRF1Q92994 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 Y_RNA.132-201ENST00000363421 102 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RNU6-1284P-201ENST00000363701 100 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RNU6-82P-201ENST00000363970 107 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RNA5SP366-201ENST00000365454 123 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RNU6-61P-201ENST00000365528 109 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RHOT1P2-201ENST00000366423 333 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RNU6-637P-201ENST00000384050 107 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RNU6-1297P-201ENST00000384415 104 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
BRF1Q92994 AL592114.1-201ENST00000403842 483 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RNA5SP56-201ENST00000410277 118 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RPL23AP26-201ENST00000412728 464 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.91□□□□□ -1.62
BRF1Q92994 BEND7P1-201ENST00000422058 457 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.91□□□□□ -1.62
BRF1Q92994 PSMA2P3-201ENST00000429685 675 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.91□□□□□ -1.62
BRF1Q92994 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.91□□□□□ -1.62
BRF1Q92994 PRPS1P1-201ENST00000445305 876 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.91□□□□□ -1.62
BRF1Q92994 AC006517.1-201ENST00000480485 328 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.91□□□□□ -1.62
BRF1Q92994 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.91□□□□□ -1.62
BRF1Q92994 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.91□□□□□ -1.62
BRF1Q92994 HIGD1AP3-201ENST00000515857 278 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 RNU6-1092P-201ENST00000516955 87 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 AC109635.4-202ENST00000531666 412 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.91□□□□□ -1.62
BRF1Q92994 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.91□□□□□ -1.62
BRF1Q92994 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.91□□□□□ -1.62
BRF1Q92994 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.91□□□□□ -1.62
BRF1Q92994 AC022655.2-201ENST00000577280 318 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 MIR3171-201ENST00000584270 74 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 BNIP3P25-201ENST00000596023 559 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 AC092807.2-201ENST00000609367 243 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 AL390240.1-201ENST00000612950 384 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 AC008785.1-201ENST00000624475 456 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 AP001350.1-201ENST00000601906 1524 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 EXOC5P1-201ENST00000510543 1969 ntBASIC4.91□□□□□ -1.62
BRF1Q92994 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRF1Q92994 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
BRF1Q92994 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
BRF1Q92994 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.9□□□□□ -1.62
BRF1Q92994 AC103710.2-202ENST00000641454 2853 ntBASIC4.9□□□□□ -1.62
BRF1Q92994 ZNF962P-201ENST00000443465 3140 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 SNORA4.3-201ENST00000365564 137 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 Y_RNA.378-201ENST00000365652 113 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 Y_RNA.422-201ENST00000384054 114 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 SNORA24.1-201ENST00000384401 135 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 SNORA37-201ENST00000384504 129 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 MIR606-201ENST00000384851 96 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 MIR93-201ENST00000385024 80 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 MIR559-201ENST00000385188 96 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 RNU2-47P-201ENST00000410649 186 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 RNU6-387P-201ENST00000411331 105 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 AL160275.2-201ENST00000412010 394 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 VN1R36P-201ENST00000414936 291 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 AC114491.1-201ENST00000416095 246 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 RPL18P10-201ENST00000425606 538 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 COX6B1P7-201ENST00000430845 235 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms