Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OR4G1P-201ENST00000588632 938 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 Z98749.2-208ENST00000381646 500 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 MTCYBP7-201ENST00000419540 1134 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 PAICSP7-201ENST00000419829 962 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 RPS6P14-201ENST00000425165 719 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 ATG12P2-201ENST00000456830 416 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 RNU6-1218P-201ENST00000458990 108 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 U3.40-201ENST00000408706 208 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 HMGN2P16-201ENST00000456802 261 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 AC022634.1-201ENST00000520765 532 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 AC084851.1-201ENST00000529105 249 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 AC010678.1-201ENST00000614118 713 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 uc_338.9-201ENST00000617424 182 ntBASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
ALMS1Q8TCU4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
ALMS1Q8TCU4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.09□□□□□ -2.24
ALMS1Q8TCU4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
ALMS1Q8TCU4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.09□□□□□ -2.24
ALMS1Q8TCU4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.09□□□□□ -2.24
ALMS1Q8TCU4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.09□□□□□ -2.24
ALMS1Q8TCU4 AC022662.1-201ENST00000580252 331 ntBASIC1.09□□□□□ -2.24
ALMS1Q8TCU4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 SDCBPP1-201ENST00000440192 890 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AC114322.1-201ENST00000506771 926 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 RNA5SP471-201ENST00000516971 106 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AP002748.2-201ENST00000528671 348 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AL121839.1-201ENST00000556233 1185 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 MTND2P13-201ENST00000577438 1039 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AC002487.1-201ENST00000604565 994 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 MTND2P29-201ENST00000438595 412 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 KATNBL1P1-201ENST00000605192 748 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AC245884.12-201ENST00000615364 59 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AC079597.1-201ENST00000624306 508 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AC008568.2-201ENST00000623862 2313 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 SNORA14A-201ENST00000364773 135 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 MIR144-201ENST00000384886 86 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 MTND4LP16-201ENST00000440828 295 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 BNIP3P2-201ENST00000441221 577 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AC104581.2-201ENST00000572227 430 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 AC098848.2-201ENST00000588023 330 ntBASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ALMS1Q8TCU4 MIRLET7G-201ENST00000362280 84 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU4-13P-201ENST00000364019 141 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 MIR607-201ENST00000385241 96 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RN7SKP101-201ENST00000411376 320 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU1-40P-201ENST00000516816 164 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU1-97P-201ENST00000516872 164 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AC023813.2-201ENST00000564321 469 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AC109486.1-201ENST00000486833 374 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 HSPE1P3-201ENST00000559254 309 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 ATP5EP1-201ENST00000510257 156 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 CENPUP2-201ENST00000555897 1186 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AL161912.3-201ENST00000605404 628 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 MIR6515-201ENST00000619843 57 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-1-201ENST00000383898 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-42P-201ENST00000384165 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-36P-201ENST00000384172 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-4P-201ENST00000384205 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-5P-201ENST00000384238 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-3P-201ENST00000384314 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-2-201ENST00000384627 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-9-201ENST00000384776 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-33P-201ENST00000384793 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms