Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 RNU4-90P-201ENST00000362773 141 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 Y_RNA.272-201ENST00000364696 102 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 SNORD116-18-201ENST00000383961 92 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AL139039.1-201ENST00000401900 692 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AL358176.3-201ENST00000420757 454 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AC022133.1-201ENST00000490961 571 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 GLUD1P3-202ENST00000508551 200 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 RNU6-1219P-201ENST00000516143 112 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AC005951.2-201ENST00000576282 495 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AL158032.1-201ENST00000605401 106 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 RNU6-85P-201ENST00000605989 107 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AC091905.4-201ENST00000623432 202 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 DNM1P47-203ENST00000571780 12667 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 AC093849.1-201ENST00000563631 2209 ntBASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.22□□□□□ -1.41
NKX2-3Q8TAU0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
NKX2-3Q8TAU0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NKX2-3Q8TAU0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.21□□□□□ -1.41
NKX2-3Q8TAU0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.21□□□□□ -1.41
NKX2-3Q8TAU0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NKX2-3Q8TAU0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NKX2-3Q8TAU0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 RN7SKP104-201ENST00000362605 328 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 RNA5SP123-201ENST00000363244 119 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-326P-201ENST00000365480 107 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.504-201ENST00000384481 104 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-516P-201ENST00000411381 104 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AC011753.3-201ENST00000443436 406 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 RPS17P13-201ENST00000448974 407 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AC009127.1-201ENST00000467090 155 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AL136126.1-201ENST00000473603 402 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 RN7SL814P-201ENST00000487715 300 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 RPL30P10-201ENST00000488148 337 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AC004980.4-201ENST00000513375 203 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AP006245.1-201ENST00000522549 120 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AC068790.4-201ENST00000602474 263 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AC098826.3-201ENST00000603823 466 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AL589994.2-201ENST00000621124 579 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 AC093671.1-201ENST00000624981 2929 ntBASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX2-3Q8TAU0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 U8.8-201ENST00000365399 135 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-1130P-201ENST00000365434 107 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 RNY3P4-201ENST00000384428 101 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 MIR23A-201ENST00000385245 73 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-754P-201ENST00000391166 107 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 RN7SKP159-201ENST00000410657 292 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-325P-201ENST00000411132 105 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 AL445433.1-201ENST00000457507 257 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 SRI-210ENST00000490437 570 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 AC006427.1-201ENST00000514359 712 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 AC087369.1-201ENST00000520775 996 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms