Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ARPC3P1-201ENST00000437218 533 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AC007000.2-201ENST00000442564 487 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 FDX1P2-201ENST00000450769 375 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 VPS26AP1-201ENST00000483197 979 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 RN7SL274P-201ENST00000492268 272 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 MIR1273D-201ENST00000577266 86 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AC012443.1-201ENST00000605605 231 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AC055876.5-201ENST00000605667 259 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AC025588.4-201ENST00000615802 908 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 AL162233.1-201ENST00000620014 944 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 CR848007.1-201ENST00000442354 1699 ntBASIC2.31□□□□□ -2.04
CCDC112Q8NEF3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 RNU6-270P-201ENST00000364131 105 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 SUMO2P12-201ENST00000405924 140 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 CR848007.2-201ENST00000424918 787 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 AL009174.1-201ENST00000426577 416 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 MTND4LP10-201ENST00000435146 291 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 HMGN3P1-201ENST00000453847 193 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 PABPC1P3-201ENST00000469174 459 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 AC078857.1-201ENST00000469870 667 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 RPS29P21-201ENST00000496272 170 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 MRPS36P2-201ENST00000512569 299 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 RNU6-1095P-201ENST00000516148 108 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 RNU6-416P-201ENST00000516265 103 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 AL020997.3-201ENST00000602843 359 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 AL450472.3-201ENST00000615578 367 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 MIR7843-201ENST00000622274 79 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 CU459211.1-201ENST00000635667 749 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 SDAD1P2-201ENST00000441308 2028 ntBASIC2.3□□□□□ -2.04
CCDC112Q8NEF3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AC009812.4-201ENST00000569134 1805 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 RNU6-1197P-201ENST00000391183 107 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 U3.40-201ENST00000408706 208 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 RNU2-40P-201ENST00000410833 196 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 MTND4LP7-201ENST00000431728 294 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 FAM103A2P-201ENST00000444122 354 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 MTND3P4-201ENST00000453537 303 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AC233279.1-201ENST00000455300 423 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AC022493.1-201ENST00000492984 337 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 IGJP1-201ENST00000522682 475 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 EEF1A1P37-201ENST00000522748 715 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 EEF1B2P4-201ENST00000551398 348 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AC095057.3-201ENST00000567102 1157 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AC074051.3-201ENST00000570238 358 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AC104763.2-201ENST00000604179 382 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AL022099.1-201ENST00000604551 712 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AP000254.1-201ENST00000609934 520 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 AC009902.3-201ENST00000606235 2172 ntBASIC2.29□□□□□ -2.04
CCDC112Q8NEF3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 MFSD8-213ENST00000641134 1327 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 SNORA68.1-201ENST00000364537 132 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 SNORD82-201ENST00000365530 70 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 RNU6-253P-201ENST00000384730 105 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AC233981.1-201ENST00000423224 461 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 RPL7L1P10-201ENST00000427790 463 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 TOMM20P4-201ENST00000427861 435 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 snoU13.15-201ENST00000459407 104 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 RPL31P60-201ENST00000478450 367 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms