Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.33□□□□□ -1.88
LDB1Q86U70 AP001148.1-201ENST00000624124 2359 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDB1Q86U70 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LDB1Q86U70 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDB1Q86U70 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
LDB1Q86U70 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LDB1Q86U70 RNU1-70P-201ENST00000362618 164 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 Y_RNA.77-201ENST00000362962 107 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDB1Q86U70 TXNP7-201ENST00000406296 293 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 FCF1P10-201ENST00000407590 479 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 U3.42-201ENST00000408746 214 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 UBE2D3P2-201ENST00000424409 445 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.33□□□□□ -1.88
LDB1Q86U70 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.33□□□□□ -1.88
LDB1Q86U70 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB1Q86U70 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB1Q86U70 TIMM9P1-201ENST00000436122 256 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB1Q86U70 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB1Q86U70 MTCO3P45-201ENST00000443036 613 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 HMGB3P8-201ENST00000449709 577 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AL049714.1-201ENST00000466686 347 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB1Q86U70 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB1Q86U70 FCF1P8-201ENST00000510322 597 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB1Q86U70 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.33□□□□□ -1.88
LDB1Q86U70 DEFB108A-201ENST00000530110 222 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB1Q86U70 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.33□□□□□ -1.88
LDB1Q86U70 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB1Q86U70 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB1Q86U70 MIR3146-201ENST00000580367 79 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 ZNF415P1-201ENST00000582279 1166 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 KC877982.1-201ENST00000602313 470 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AC006557.5-201ENST00000603126 811 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AC239868.4-201ENST00000608318 671 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AP000254.1-201ENST00000609934 520 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AC245517.5-201ENST00000611529 162 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AL158063.1-201ENST00000615349 536 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AC110801.1-201ENST00000623590 212 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AC090740.1-201ENST00000623193 2262 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AC138915.3-201ENST00000562908 1389 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 AF117829.1-206ENST00000621883 3802 ntBASIC3.33□□□□□ -1.88
LDB1Q86U70 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB1Q86U70 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB1Q86U70 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDB1Q86U70 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDB1Q86U70 AC008568.2-201ENST00000623862 2313 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LDB1Q86U70 FGF7P2-201ENST00000332473 296 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 RNA5SP295-201ENST00000362655 121 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 MIR493-201ENST00000385254 89 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 RPL7L1P10-201ENST00000427790 463 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AL356867.1-201ENST00000429623 299 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.32□□□□□ -1.88
LDB1Q86U70 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB1Q86U70 PDSS1P2-201ENST00000449397 678 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
LDB1Q86U70 MTND2P24-201ENST00000453434 806 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.32□□□□□ -1.88
LDB1Q86U70 RPL31P60-201ENST00000478450 367 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.32□□□□□ -1.88
LDB1Q86U70 AC080014.1-201ENST00000496877 1201 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LDB1Q86U70 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.32□□□□□ -1.88
LDB1Q86U70 CDC42P4-201ENST00000510507 563 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC117532.1-201ENST00000514638 323 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB1Q86U70 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB1Q86U70 AL157394.1-201ENST00000562983 1224 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.32□□□□□ -1.88
LDB1Q86U70 RPL23AP84-201ENST00000571193 464 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.32□□□□□ -1.88
LDB1Q86U70 AF038458.1-201ENST00000588406 262 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.32□□□□□ -1.88
LDB1Q86U70 BNIP3P8-201ENST00000597863 560 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 U3.45-201ENST00000607547 219 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 RNU6-87P-201ENST00000607561 108 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC108747.1-201ENST00000609508 535 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC025594.3-201ENST00000613068 790 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 AC013476.2-201ENST00000614456 459 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LDB1Q86U70 AC108479.2-201ENST00000617314 601 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 MIR6075-201ENST00000620782 95 ntBASIC3.32□□□□□ -1.88
LDB1Q86U70 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
LDB1Q86U70 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDB1Q86U70 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDB1Q86U70 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
LDB1Q86U70 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDB1Q86U70 AL356274.2-201ENST00000624379 3752 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.31□□□□□ -1.88
LDB1Q86U70 ZNF807-201ENST00000328088 1707 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms