Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 NCAPGP1-201ENST00000505112 1814 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC007685.1-201ENST00000329806 452 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 Y_RNA.33-201ENST00000362591 102 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 Y_RNA.200-201ENST00000364018 102 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 RNU6-395P-201ENST00000365662 106 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 Y_RNA.439-201ENST00000384119 94 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 Y_RNA.458-201ENST00000384240 102 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 SNORA16A-201ENST00000384342 137 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 RNA5SP372-201ENST00000390836 115 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC116036.1-201ENST00000412199 367 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC091286.1-201ENST00000431233 461 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AL591043.1-201ENST00000432461 424 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 RPS20P1-201ENST00000434853 354 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 SNORA59A-201ENST00000459326 152 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC087190.1-201ENST00000484462 480 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC107032.1-201ENST00000485945 480 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 Y_RNA.703-201ENST00000516846 111 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 RN7SKP260-201ENST00000516907 149 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 RNU6-255P-201ENST00000516957 105 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 MIR4311-201ENST00000580794 100 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 MIR8076-201ENST00000611401 83 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 ZYXP1-201ENST00000617638 118 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC011369.2-201ENST00000624423 1567 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 RLIMP1-201ENST00000339626 1680 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 AC100778.3-201ENST00000580060 1750 ntBASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF38BQ5VTL8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AL049555.1-201ENST00000562834 1933 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 RNU6-827P-201ENST00000365553 106 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 Y_RNA.793-201ENST00000411222 111 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AL354766.1-201ENST00000423396 542 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 TOMM20P4-201ENST00000427861 435 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 ACA64.4-201ENST00000459070 127 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 RNA5SP471-201ENST00000516971 106 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 HNRNPCP4-201ENST00000571636 900 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC002545.1-201ENST00000592511 181 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AP000787.2-201ENST00000604432 568 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC127459.3-201ENST00000624328 466 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC243829.7-201ENST00000633081 225 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC068769.1-201ENST00000474767 2426 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 AC092692.1-201ENST00000623625 2595 ntBASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
PRPF38BQ5VTL8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 RNA5SP52-201ENST00000362448 134 ntBASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 snoU2_19.2-201ENST00000363024 80 ntBASIC5.86□□□□□ -1.47
PRPF38BQ5VTL8 RNA5SP240-201ENST00000365355 128 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms