Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
XPCQ01831 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
XPCQ01831 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.57□□□□□ -1.52
XPCQ01831 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
XPCQ01831 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
XPCQ01831 AC073343.1-201ENST00000328239 651 ntBASIC5.57□□□□□ -1.52
XPCQ01831 Y_RNA.166-201ENST00000363730 102 ntBASIC5.57□□□□□ -1.52
XPCQ01831 MIR195-201ENST00000385194 87 ntBASIC5.57□□□□□ -1.52
XPCQ01831 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.57□□□□□ -1.52
XPCQ01831 AC016831.2-201ENST00000417179 352 ntBASIC5.57□□□□□ -1.52
XPCQ01831 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.57□□□□□ -1.52
XPCQ01831 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.57□□□□□ -1.52
XPCQ01831 RPL35AP12-201ENST00000425362 338 ntBASIC5.57□□□□□ -1.52
XPCQ01831 AC008850.1-201ENST00000427546 362 ntBASIC5.57□□□□□ -1.52
XPCQ01831 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.57□□□□□ -1.52
XPCQ01831 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.57□□□□□ -1.52
XPCQ01831 RPL7P12-201ENST00000446719 750 ntBASIC5.57□□□□□ -1.52
XPCQ01831 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.57□□□□□ -1.52
XPCQ01831 RPL7P23-201ENST00000493874 747 ntBASIC5.57□□□□□ -1.52
XPCQ01831 AC004062.1-201ENST00000509926 645 ntBASIC5.57□□□□□ -1.52
XPCQ01831 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.57□□□□□ -1.52
XPCQ01831 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.57□□□□□ -1.52
XPCQ01831 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.57□□□□□ -1.52
XPCQ01831 IGKV2D-19-201ENST00000523346 262 ntBASIC5.57□□□□□ -1.52
XPCQ01831 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.57□□□□□ -1.52
XPCQ01831 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.57□□□□□ -1.52
XPCQ01831 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.57□□□□□ -1.52
XPCQ01831 AC012669.1-201ENST00000603209 283 ntBASIC5.57□□□□□ -1.52
XPCQ01831 AC090617.10-201ENST00000624308 134 ntBASIC5.57□□□□□ -1.52
XPCQ01831 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
XPCQ01831 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
XPCQ01831 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
XPCQ01831 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
XPCQ01831 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
XPCQ01831 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.56□□□□□ -1.52
XPCQ01831 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
XPCQ01831 Z82217.1-201ENST00000625157 8149 ntBASIC5.56□□□□□ -1.52
XPCQ01831 AC092435.4-201ENST00000623012 4159 ntBASIC5.56□□□□□ -1.52
XPCQ01831 RNVU1-14-201ENST00000384770 164 ntBASIC5.56□□□□□ -1.52
XPCQ01831 RNU4-65P-201ENST00000410473 140 ntBASIC5.56□□□□□ -1.52
XPCQ01831 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.56□□□□□ -1.52
XPCQ01831 EEF1A1P40-201ENST00000412883 573 ntBASIC5.56□□□□□ -1.52
XPCQ01831 AC007390.1-201ENST00000415722 356 ntBASIC5.56□□□□□ -1.52
XPCQ01831 UBE2FP1-201ENST00000416536 447 ntBASIC5.56□□□□□ -1.52
XPCQ01831 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.56□□□□□ -1.52
XPCQ01831 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.56□□□□□ -1.52
XPCQ01831 MTND3P16-201ENST00000452205 344 ntBASIC5.56□□□□□ -1.52
XPCQ01831 RPL21P103-201ENST00000479921 488 ntBASIC5.56□□□□□ -1.52
XPCQ01831 RNU4-29P-201ENST00000515943 174 ntBASIC5.56□□□□□ -1.52
XPCQ01831 AC008694.2-201ENST00000517591 306 ntBASIC5.56□□□□□ -1.52
XPCQ01831 OR5AL2P-201ENST00000532185 920 ntBASIC5.56□□□□□ -1.52
XPCQ01831 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.56□□□□□ -1.52
XPCQ01831 OR5B10P-201ENST00000532869 642 ntBASIC5.56□□□□□ -1.52
XPCQ01831 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.56□□□□□ -1.52
XPCQ01831 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.56□□□□□ -1.52
XPCQ01831 VN1R80P-201ENST00000597126 338 ntBASIC5.56□□□□□ -1.52
XPCQ01831 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
XPCQ01831 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
XPCQ01831 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
XPCQ01831 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
XPCQ01831 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
XPCQ01831 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
XPCQ01831 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
XPCQ01831 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
XPCQ01831 AC067945.1-201ENST00000342609 618 ntBASIC5.55□□□□□ -1.52
XPCQ01831 RNU6-1249P-201ENST00000363237 111 ntBASIC5.55□□□□□ -1.52
XPCQ01831 RNU6-1011P-201ENST00000384668 107 ntBASIC5.55□□□□□ -1.52
XPCQ01831 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
XPCQ01831 AL356432.1-201ENST00000405809 419 ntBASIC5.55□□□□□ -1.52
XPCQ01831 RNU6-193P-201ENST00000410977 107 ntBASIC5.55□□□□□ -1.52
XPCQ01831 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.55□□□□□ -1.52
XPCQ01831 DUTP6-201ENST00000425573 462 ntBASIC5.55□□□□□ -1.52
XPCQ01831 AL358472.1-201ENST00000431295 329 ntBASIC5.55□□□□□ -1.52
XPCQ01831 TAAR7P-201ENST00000436141 242 ntBASIC5.55□□□□□ -1.52
XPCQ01831 RPS26P2-201ENST00000440331 348 ntBASIC5.55□□□□□ -1.52
XPCQ01831 ABCF2P2-201ENST00000450549 296 ntBASIC5.55□□□□□ -1.52
XPCQ01831 SNORD97-201ENST00000459187 142 ntBASIC5.55□□□□□ -1.52
XPCQ01831 AC092436.1-201ENST00000506450 503 ntBASIC5.55□□□□□ -1.52
XPCQ01831 FGF7P4-201ENST00000509595 295 ntBASIC5.55□□□□□ -1.52
XPCQ01831 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.55□□□□□ -1.52
XPCQ01831 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.55□□□□□ -1.52
XPCQ01831 RNU6-1095P-201ENST00000516148 108 ntBASIC5.55□□□□□ -1.52
XPCQ01831 Y_RNA.675-201ENST00000516389 149 ntBASIC5.55□□□□□ -1.52
XPCQ01831 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.55□□□□□ -1.52
XPCQ01831 AP005435.4-201ENST00000529514 284 ntBASIC5.55□□□□□ -1.52
XPCQ01831 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.55□□□□□ -1.52
XPCQ01831 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.55□□□□□ -1.52
XPCQ01831 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
XPCQ01831 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.55□□□□□ -1.52
XPCQ01831 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.55□□□□□ -1.52
XPCQ01831 AC010680.4-201ENST00000605334 543 ntBASIC5.55□□□□□ -1.52
XPCQ01831 AC005858.4-201ENST00000623191 700 ntBASIC5.55□□□□□ -1.52
XPCQ01831 FRG1KP-201ENST00000623592 341 ntBASIC5.55□□□□□ -1.52
XPCQ01831 AC244517.1-201ENST00000606030 2086 ntBASIC5.55□□□□□ -1.52
XPCQ01831 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
XPCQ01831 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
XPCQ01831 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.55□□□□□ -1.52
XPCQ01831 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
XPCQ01831 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.55□□□□□ -1.52
XPCQ01831 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms