Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC004009.2-201ENST00000623016 728 ntBASIC2.04□□□□□ -2.08
CLDN12P56749 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN12P56749 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN12P56749 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN12P56749 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
CLDN12P56749 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN12P56749 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.03□□□□□ -2.08
CLDN12P56749 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN12P56749 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
CLDN12P56749 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN12P56749 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CLDN12P56749 RNU6-492P-201ENST00000363035 104 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 RNU6-741P-201ENST00000383889 107 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 RNU6-217P-201ENST00000384164 104 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 MIR325-201ENST00000385260 98 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 UBE2V1P15-201ENST00000407776 448 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN12P56749 AC018630.2-202ENST00000422992 927 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN12P56749 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN12P56749 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN12P56749 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN12P56749 Z82210.1-201ENST00000440037 231 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN12P56749 EEF1B2P7-201ENST00000451177 676 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 TRGVB-201ENST00000453257 471 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 RPL36AP51-201ENST00000487216 318 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 AC138853.1-201ENST00000503549 823 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 AP000889.2-201ENST00000532684 490 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN12P56749 AL391261.3-201ENST00000557194 520 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN12P56749 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN12P56749 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN12P56749 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN12P56749 BNIP3P22-201ENST00000593399 556 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN12P56749 AL035411.2-201ENST00000604022 421 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 AC092954.1-201ENST00000609121 445 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 AL450472.3-201ENST00000615578 367 ntBASIC2.03□□□□□ -2.08
CLDN12P56749 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN12P56749 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN12P56749 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CLDN12P56749 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.09
CLDN12P56749 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CLDN12P56749 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
CLDN12P56749 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN12P56749 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN12P56749 DDX10P1-201ENST00000448545 1933 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN12P56749 RNU6-481P-201ENST00000384194 107 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 MIR128-1-201ENST00000384921 82 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 SNORA11.1-201ENST00000408133 129 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 RNU4-72P-201ENST00000410754 173 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 RNU6-575P-201ENST00000411326 105 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 AC007560.1-201ENST00000426912 237 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 AC000041.1-201ENST00000439655 175 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 OR10R1P-201ENST00000441524 1141 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 VN1R10P-201ENST00000447106 875 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN12P56749 AP1S2P1-201ENST00000457344 379 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN12P56749 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN12P56749 GTF2IP9-201ENST00000502460 301 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 SUMO2P6-201ENST00000505273 288 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 XKRY-201ENST00000510392 1100 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 AC026436.1-201ENST00000510537 270 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN12P56749 RNU5F-8P-201ENST00000515941 111 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 SNORA48.9-201ENST00000516419 162 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN12P56749 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN12P56749 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN12P56749 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN12P56749 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN12P56749 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN12P56749 LARP7P2-201ENST00000575306 125 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN12P56749 ATP1B3P1-201ENST00000605365 821 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN12P56749 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN12P56749 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN12P56749 U4.3-201ENST00000621047 82 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 U6.101-201ENST00000637707 76 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.02□□□□□ -2.09
CLDN12P56749 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN12P56749 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.01□□□□□ -2.09
CLDN12P56749 MTND4P27-201ENST00000450813 1354 ntBASIC2.01□□□□□ -2.09
CLDN12P56749 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN12P56749 GNG5P1-201ENST00000255500 204 ntBASIC2.01□□□□□ -2.09
CLDN12P56749 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN12P56749 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CLDN12P56749 SNORA36C-201ENST00000384289 132 ntBASIC2.01□□□□□ -2.09
CLDN12P56749 MIR518C-201ENST00000384822 101 ntBASIC2.01□□□□□ -2.09
CLDN12P56749 MIR34A-201ENST00000385130 110 ntBASIC2.01□□□□□ -2.09
CLDN12P56749 SNORA48.2-201ENST00000390926 124 ntBASIC2.01□□□□□ -2.09
CLDN12P56749 HMGB1P17-201ENST00000403495 628 ntBASIC2.01□□□□□ -2.09
CLDN12P56749 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN12P56749 WARS2P1-201ENST00000429678 537 ntBASIC2.01□□□□□ -2.09
CLDN12P56749 RPS15AP28-201ENST00000435088 386 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms