Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 MLLT10P2-201ENST00000506434 249 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 AC008885.2-201ENST00000509506 930 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 SNORA31.23-201ENST00000517219 133 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 AC018630.1-201ENST00000541376 925 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.54□□□□□ -2.16
POLR2JP52435 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.54□□□□□ -2.16
POLR2JP52435 ATP5F1P7-201ENST00000567330 760 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 FAM60BP-201ENST00000578364 658 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 AC025588.3-201ENST00000604182 274 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 DPRXP5-201ENST00000604662 539 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 OR10AB1P-201ENST00000609613 938 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.54□□□□□ -2.16
POLR2JP52435 AC090116.1-201ENST00000615679 446 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 AC025016.1-201ENST00000616746 682 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 MIR6852-201ENST00000621699 66 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 MTND2P41-201ENST00000637599 773 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
POLR2JP52435 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
POLR2JP52435 AC087359.1-201ENST00000508335 1740 ntBASIC1.54□□□□□ -2.16
POLR2JP52435 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
POLR2JP52435 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.54□□□□□ -2.16
POLR2JP52435 UBE2L2-201ENST00000254302 429 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 MIR421-201ENST00000365696 85 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 RNU6-198P-201ENST00000384258 104 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 ZNF876P-202ENST00000398732 1485 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 RPS20P15-201ENST00000412792 311 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.53□□□□□ -2.16
POLR2JP52435 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.53□□□□□ -2.16
POLR2JP52435 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.53□□□□□ -2.16
POLR2JP52435 NDUFB4P6-201ENST00000436819 366 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 IFNA20P-201ENST00000436840 528 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 OR10R1P-201ENST00000441524 1141 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 AC004865.1-201ENST00000442276 1003 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 CR848007.1-201ENST00000442354 1699 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 PNPLA4P1-201ENST00000458328 305 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 AC069528.1-202ENST00000482888 637 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
POLR2JP52435 RPL23AP63-201ENST00000498752 471 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 AC011352.3-201ENST00000505162 593 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 MTCO1P4-201ENST00000520516 1409 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 AC090888.1-201ENST00000561335 1141 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.53□□□□□ -2.16
POLR2JP52435 AL096840.1-201ENST00000603287 93 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 AC009318.2-201ENST00000610917 651 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 uc_338.5-201ENST00000611839 155 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 AL161629.2-201ENST00000615347 275 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
POLR2JP52435 UCA1.1-201ENST00000620952 75 ntBASIC1.53□□□□□ -2.16
POLR2JP52435 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
POLR2JP52435 SDAD1P2-201ENST00000441308 2028 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
POLR2JP52435 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
POLR2JP52435 SNORA68.1-201ENST00000364537 132 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 MIR676-201ENST00000390702 67 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 CIR1P3-201ENST00000405137 479 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 RNU6-1140P-201ENST00000410517 106 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 AC099677.1-201ENST00000420575 175 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 AL139413.1-201ENST00000421309 217 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.52□□□□□ -2.17
POLR2JP52435 RPL7P12-201ENST00000446719 750 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.52□□□□□ -2.17
POLR2JP52435 AC104564.1-201ENST00000493028 407 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 PCNAP1-201ENST00000505363 709 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 SNORA70.16-201ENST00000516390 95 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 RNU6-250P-201ENST00000516958 103 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.52□□□□□ -2.17
POLR2JP52435 C1DP5-201ENST00000525775 383 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 CASP1P1-201ENST00000526345 212 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.52□□□□□ -2.17
POLR2JP52435 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.52□□□□□ -2.17
POLR2JP52435 AC012669.1-201ENST00000603209 283 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
POLR2JP52435 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
POLR2JP52435 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.52□□□□□ -2.17
POLR2JP52435 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 AC027309.3-201ENST00000623419 351 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.52□□□□□ -2.17
POLR2JP52435 HPVC1-201ENST00000629899 1198 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 AL356118.1-201ENST00000635272 1078 ntBASIC1.52□□□□□ -2.17
POLR2JP52435 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.51□□□□□ -2.17
POLR2JP52435 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.51□□□□□ -2.17
POLR2JP52435 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
POLR2JP52435 RNU6-821P-201ENST00000390995 107 ntBASIC1.51□□□□□ -2.17
POLR2JP52435 RNU4-26P-201ENST00000410270 107 ntBASIC1.51□□□□□ -2.17
POLR2JP52435 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.51□□□□□ -2.17
POLR2JP52435 RPL31P63-201ENST00000422565 375 ntBASIC1.51□□□□□ -2.17
POLR2JP52435 RPL35AP22-201ENST00000436855 335 ntBASIC1.51□□□□□ -2.17
POLR2JP52435 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.51□□□□□ -2.17
POLR2JP52435 AC233982.1-201ENST00000451247 436 ntBASIC1.51□□□□□ -2.17
POLR2JP52435 NAP1L1P3-201ENST00000462291 880 ntBASIC1.51□□□□□ -2.17
POLR2JP52435 AC068587.2-201ENST00000478386 781 ntBASIC1.51□□□□□ -2.17
POLR2JP52435 RPS29P21-201ENST00000496272 170 ntBASIC1.51□□□□□ -2.17
POLR2JP52435 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.51□□□□□ -2.17
POLR2JP52435 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.51□□□□□ -2.17
POLR2JP52435 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
POLR2JP52435 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.51□□□□□ -2.17
POLR2JP52435 HMGB1P1-201ENST00000522557 636 ntBASIC1.51□□□□□ -2.17
POLR2JP52435 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
POLR2JP52435 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.51□□□□□ -2.17
POLR2JP52435 CBX3P4-201ENST00000538909 354 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms