Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU6-1158P-201ENST00000391167 107 ntBASIC4.71□□□□□ -1.66
MRE11P49959 FAT1P1-201ENST00000406588 507 ntBASIC4.71□□□□□ -1.66
MRE11P49959 PDCL2P1-201ENST00000419302 352 ntBASIC4.71□□□□□ -1.66
MRE11P49959 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.71□□□□□ -1.66
MRE11P49959 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.71□□□□□ -1.66
MRE11P49959 KCTD9P3-201ENST00000434597 1169 ntBASIC4.71□□□□□ -1.66
MRE11P49959 TAAR7P-201ENST00000436141 242 ntBASIC4.71□□□□□ -1.66
MRE11P49959 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.71□□□□□ -1.66
MRE11P49959 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.71□□□□□ -1.66
MRE11P49959 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.71□□□□□ -1.66
MRE11P49959 RNU6-261P-201ENST00000459506 102 ntBASIC4.71□□□□□ -1.66
MRE11P49959 AC087879.1-201ENST00000474343 374 ntBASIC4.71□□□□□ -1.66
MRE11P49959 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.71□□□□□ -1.66
MRE11P49959 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.71□□□□□ -1.66
MRE11P49959 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.71□□□□□ -1.66
MRE11P49959 RNU6-1231P-201ENST00000517185 103 ntBASIC4.71□□□□□ -1.66
MRE11P49959 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.71□□□□□ -1.66
MRE11P49959 AC022616.3-201ENST00000523940 148 ntBASIC4.71□□□□□ -1.66
MRE11P49959 AP003072.2-201ENST00000527756 676 ntBASIC4.71□□□□□ -1.66
MRE11P49959 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.71□□□□□ -1.66
MRE11P49959 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.71□□□□□ -1.66
MRE11P49959 AL356432.3-201ENST00000568952 465 ntBASIC4.71□□□□□ -1.66
MRE11P49959 AC013553.2-201ENST00000604244 589 ntBASIC4.71□□□□□ -1.66
MRE11P49959 AC010680.4-201ENST00000605334 543 ntBASIC4.71□□□□□ -1.66
MRE11P49959 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.71□□□□□ -1.66
MRE11P49959 AL355472.4-201ENST00000610233 626 ntBASIC4.71□□□□□ -1.66
MRE11P49959 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.71□□□□□ -1.66
MRE11P49959 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.71□□□□□ -1.66
MRE11P49959 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
MRE11P49959 CYP3A51P-201ENST00000633513 256 ntBASIC4.71□□□□□ -1.66
MRE11P49959 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
MRE11P49959 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.71□□□□□ -1.66
MRE11P49959 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MRE11P49959 AC116096.1-201ENST00000566804 2314 ntBASIC4.71□□□□□ -1.66
MRE11P49959 ZNF33CP-201ENST00000432492 2030 ntBASIC4.7□□□□□ -1.66
MRE11P49959 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MRE11P49959 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MRE11P49959 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.7□□□□□ -1.66
MRE11P49959 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
MRE11P49959 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
MRE11P49959 MIR383-201ENST00000362257 73 ntBASIC4.7□□□□□ -1.66
MRE11P49959 Y_RNA.157-201ENST00000363638 102 ntBASIC4.7□□□□□ -1.66
MRE11P49959 SNRPFP1-201ENST00000414761 252 ntBASIC4.7□□□□□ -1.66
MRE11P49959 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.7□□□□□ -1.66
MRE11P49959 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.7□□□□□ -1.66
MRE11P49959 AC007283.2-201ENST00000424739 197 ntBASIC4.7□□□□□ -1.66
MRE11P49959 AC236972.1-201ENST00000433225 199 ntBASIC4.7□□□□□ -1.66
MRE11P49959 AC016691.1-201ENST00000441321 413 ntBASIC4.7□□□□□ -1.66
MRE11P49959 VN1R105P-201ENST00000486595 910 ntBASIC4.7□□□□□ -1.66
MRE11P49959 NIPA2P2-201ENST00000496376 1083 ntBASIC4.7□□□□□ -1.66
MRE11P49959 AC093677.1-201ENST00000514414 678 ntBASIC4.7□□□□□ -1.66
MRE11P49959 SNORA40.12-201ENST00000516329 111 ntBASIC4.7□□□□□ -1.66
MRE11P49959 RNU6-1220P-201ENST00000517126 108 ntBASIC4.7□□□□□ -1.66
MRE11P49959 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.7□□□□□ -1.66
MRE11P49959 TRMT10BP1-201ENST00000519377 943 ntBASIC4.7□□□□□ -1.66
MRE11P49959 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.7□□□□□ -1.66
MRE11P49959 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.7□□□□□ -1.66
MRE11P49959 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.7□□□□□ -1.66
MRE11P49959 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.7□□□□□ -1.66
MRE11P49959 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.7□□□□□ -1.66
MRE11P49959 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.7□□□□□ -1.66
MRE11P49959 AC005000.2-201ENST00000605468 310 ntBASIC4.7□□□□□ -1.66
MRE11P49959 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.7□□□□□ -1.66
MRE11P49959 AL132765.2-201ENST00000610812 351 ntBASIC4.7□□□□□ -1.66
MRE11P49959 DISC2.1-201ENST00000612827 205 ntBASIC4.7□□□□□ -1.66
MRE11P49959 AC090574.1-201ENST00000623186 233 ntBASIC4.7□□□□□ -1.66
MRE11P49959 AC008013.2-202ENST00000637965 364 ntBASIC4.7□□□□□ -1.66
MRE11P49959 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MRE11P49959 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MRE11P49959 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
MRE11P49959 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MRE11P49959 AC130650.2-201ENST00000618736 2403 ntBASIC4.7□□□□□ -1.66
MRE11P49959 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MRE11P49959 PRO1804-201ENST00000623780 2050 ntBASIC4.69□□□□□ -1.66
MRE11P49959 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
MRE11P49959 MTND5P33-201ENST00000571250 1450 ntBASIC4.69□□□□□ -1.66
MRE11P49959 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MRE11P49959 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.69□□□□□ -1.66
MRE11P49959 AC097714.1-201ENST00000511272 1647 ntBASIC4.69□□□□□ -1.66
MRE11P49959 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.69□□□□□ -1.66
MRE11P49959 AC006504.1-201ENST00000562493 3666 ntBASIC4.69□□□□□ -1.66
MRE11P49959 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MRE11P49959 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
MRE11P49959 RNU6-28P-201ENST00000362378 107 ntBASIC4.69□□□□□ -1.66
MRE11P49959 RNA5SP432-201ENST00000362480 116 ntBASIC4.69□□□□□ -1.66
MRE11P49959 RNU4-79P-201ENST00000362764 141 ntBASIC4.69□□□□□ -1.66
MRE11P49959 RNU6-108P-201ENST00000365558 107 ntBASIC4.69□□□□□ -1.66
MRE11P49959 Y_RNA.460-201ENST00000384255 102 ntBASIC4.69□□□□□ -1.66
MRE11P49959 AL356421.1-201ENST00000403255 413 ntBASIC4.69□□□□□ -1.66
MRE11P49959 AL356432.1-201ENST00000405809 419 ntBASIC4.69□□□□□ -1.66
MRE11P49959 RNU6-1068P-201ENST00000410958 103 ntBASIC4.69□□□□□ -1.66
MRE11P49959 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.69□□□□□ -1.66
MRE11P49959 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.69□□□□□ -1.66
MRE11P49959 AC119618.1-201ENST00000434191 222 ntBASIC4.69□□□□□ -1.66
MRE11P49959 RPS15AP9-201ENST00000439856 381 ntBASIC4.69□□□□□ -1.66
MRE11P49959 AL162151.2-201ENST00000448875 158 ntBASIC4.69□□□□□ -1.66
MRE11P49959 HMGN1P10-201ENST00000474557 553 ntBASIC4.69□□□□□ -1.66
MRE11P49959 HMGN1P13-201ENST00000505795 138 ntBASIC4.69□□□□□ -1.66
MRE11P49959 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.69□□□□□ -1.66
MRE11P49959 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms