Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTCFP49711 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.89□□□□□ -1.79
CTCFP49711 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.89□□□□□ -1.79
CTCFP49711 AL021407.1-201ENST00000404531 386 ntBASIC3.88□□□□□ -1.79
CTCFP49711 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTCFP49711 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.88□□□□□ -1.79
CTCFP49711 AL512286.1-201ENST00000439244 400 ntBASIC3.88□□□□□ -1.79
CTCFP49711 MTND2P22-201ENST00000444325 1033 ntBASIC3.88□□□□□ -1.79
CTCFP49711 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.88□□□□□ -1.79
CTCFP49711 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.88□□□□□ -1.79
CTCFP49711 AC104308.1-201ENST00000454621 333 ntBASIC3.88□□□□□ -1.79
CTCFP49711 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.88□□□□□ -1.79
CTCFP49711 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.88□□□□□ -1.79
CTCFP49711 AC093534.1-201ENST00000504977 132 ntBASIC3.88□□□□□ -1.79
CTCFP49711 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTCFP49711 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.88□□□□□ -1.79
CTCFP49711 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.88□□□□□ -1.79
CTCFP49711 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.88□□□□□ -1.79
CTCFP49711 SYF2P1-201ENST00000550658 413 ntBASIC3.88□□□□□ -1.79
CTCFP49711 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.88□□□□□ -1.79
CTCFP49711 ROCK1P1-201ENST00000573767 549 ntBASIC3.88□□□□□ -1.79
CTCFP49711 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.88□□□□□ -1.79
CTCFP49711 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.88□□□□□ -1.79
CTCFP49711 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.88□□□□□ -1.79
CTCFP49711 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.88□□□□□ -1.79
CTCFP49711 AC110760.3-201ENST00000598794 467 ntBASIC3.88□□□□□ -1.79
CTCFP49711 AC112187.2-201ENST00000604345 283 ntBASIC3.88□□□□□ -1.79
CTCFP49711 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTCFP49711 AC097065.2-201ENST00000608159 533 ntBASIC3.88□□□□□ -1.79
CTCFP49711 AL590099.1-201ENST00000615276 138 ntBASIC3.88□□□□□ -1.79
CTCFP49711 AC091931.1-201ENST00000623488 728 ntBASIC3.88□□□□□ -1.79
CTCFP49711 AC091965.5-201ENST00000624785 342 ntBASIC3.88□□□□□ -1.79
CTCFP49711 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTCFP49711 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.87□□□□□ -1.79
CTCFP49711 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTCFP49711 RNU6-501P-201ENST00000364072 100 ntBASIC3.87□□□□□ -1.79
CTCFP49711 RNU6-853P-201ENST00000364306 107 ntBASIC3.87□□□□□ -1.79
CTCFP49711 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CTCFP49711 EI24P2-201ENST00000397776 1076 ntBASIC3.87□□□□□ -1.79
CTCFP49711 RN7SKP53-201ENST00000411337 315 ntBASIC3.87□□□□□ -1.79
CTCFP49711 RPL7P8-201ENST00000411964 730 ntBASIC3.87□□□□□ -1.79
CTCFP49711 NUP35P1-201ENST00000422734 947 ntBASIC3.87□□□□□ -1.79
CTCFP49711 DUTP6-201ENST00000425573 462 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AL365184.2-201ENST00000431139 435 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.87□□□□□ -1.79
CTCFP49711 EPS15P1-201ENST00000448836 336 ntBASIC3.87□□□□□ -1.79
CTCFP49711 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.87□□□□□ -1.79
CTCFP49711 KATNBL1P6-201ENST00000453433 915 ntBASIC3.87□□□□□ -1.79
CTCFP49711 SNORD121B-201ENST00000458838 81 ntBASIC3.87□□□□□ -1.79
CTCFP49711 snoU13.4-201ENST00000458916 104 ntBASIC3.87□□□□□ -1.79
CTCFP49711 RN7SL330P-201ENST00000469709 307 ntBASIC3.87□□□□□ -1.79
CTCFP49711 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.87□□□□□ -1.79
CTCFP49711 AC021382.1-201ENST00000483523 359 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AC096751.1-202ENST00000502691 1067 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.87□□□□□ -1.79
CTCFP49711 AC008885.1-201ENST00000514930 301 ntBASIC3.87□□□□□ -1.79
CTCFP49711 RNU1-61P-201ENST00000516107 151 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AL356057.1-201ENST00000533798 831 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.87□□□□□ -1.79
CTCFP49711 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.87□□□□□ -1.79
CTCFP49711 PCMTD1P2-201ENST00000565017 355 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.87□□□□□ -1.79
CTCFP49711 MIR4307-201ENST00000582802 84 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AL022161.1-201ENST00000604390 213 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AC092354.1-201ENST00000606057 376 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AC002550.2-201ENST00000621246 394 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AL360181.4-201ENST00000621752 134 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AC008443.7-201ENST00000622195 246 ntBASIC3.87□□□□□ -1.79
CTCFP49711 AC012321.1-201ENST00000561622 1588 ntBASIC3.87□□□□□ -1.79
CTCFP49711 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CTCFP49711 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CTCFP49711 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTCFP49711 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTCFP49711 AC093010.3-201ENST00000570269 15214 ntBASIC3.86□□□□□ -1.79
CTCFP49711 PABPC1P9-201ENST00000426076 1612 ntBASIC3.86□□□□□ -1.79
CTCFP49711 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CTCFP49711 RNU6-97P-201ENST00000363387 104 ntBASIC3.86□□□□□ -1.79
CTCFP49711 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.86□□□□□ -1.79
CTCFP49711 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 RPS27AP14-201ENST00000422868 454 ntBASIC3.86□□□□□ -1.79
CTCFP49711 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 AC108734.1-201ENST00000439549 399 ntBASIC3.86□□□□□ -1.79
CTCFP49711 RPS29P31-201ENST00000446147 164 ntBASIC3.86□□□□□ -1.79
CTCFP49711 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 AC010468.1-201ENST00000461022 817 ntBASIC3.86□□□□□ -1.79
CTCFP49711 AC034222.1-201ENST00000494052 532 ntBASIC3.86□□□□□ -1.79
CTCFP49711 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.86□□□□□ -1.79
CTCFP49711 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.86□□□□□ -1.79
CTCFP49711 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 RNA5SP367-201ENST00000516557 118 ntBASIC3.86□□□□□ -1.79
CTCFP49711 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 AC091489.2-201ENST00000566263 604 ntBASIC3.86□□□□□ -1.79
CTCFP49711 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 AC034268.2-201ENST00000571784 482 ntBASIC3.86□□□□□ -1.79
CTCFP49711 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.86□□□□□ -1.79
CTCFP49711 AC008507.1-201ENST00000587506 734 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms