Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SNORD84-203ENST00000584275 78 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 NRBF2P1-201ENST00000587407 859 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 AL035411.2-201ENST00000604022 421 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AC104237.2-201ENST00000612456 443 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AC005332.6-201ENST00000613178 446 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AC068831.7-201ENST00000616954 363 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AC091046.2-201ENST00000620775 665 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CXCL12P48061 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.41□□□□□ -2.02
CXCL12P48061 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL12P48061 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.4□□□□□ -2.02
CXCL12P48061 AC091564.4-201ENST00000533934 2194 ntBASIC2.4□□□□□ -2.02
CXCL12P48061 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.4□□□□□ -2.03
CXCL12P48061 SNRPEP3-201ENST00000338402 276 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 RNU6-50P-201ENST00000362356 103 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 DEFB109C-201ENST00000382575 264 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 DEFB109B-201ENST00000382656 264 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 SNORD116-12-201ENST00000384468 92 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 MIR506-201ENST00000384998 124 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 RNU2-15P-201ENST00000410692 191 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 Z75741.2-201ENST00000417272 1167 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 MRPS36P1-201ENST00000421291 307 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL12P48061 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.4□□□□□ -2.03
CXCL12P48061 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.4□□□□□ -2.03
CXCL12P48061 RABEPKP1-201ENST00000440529 1026 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL12P48061 snoU13.4-201ENST00000458916 104 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC104472.2-201ENST00000469035 601 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC126182.1-201ENST00000478134 357 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC108734.3-201ENST00000481241 1165 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.4□□□□□ -2.03
CXCL12P48061 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL12P48061 AC096751.1-202ENST00000502691 1067 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL12P48061 AC006390.1-201ENST00000508068 283 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.4□□□□□ -2.03
CXCL12P48061 RNU6-1225P-201ENST00000516336 65 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
CXCL12P48061 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.4□□□□□ -2.03
CXCL12P48061 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL12P48061 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL12P48061 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL12P48061 SNRPGP18-201ENST00000553000 214 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL12P48061 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.4□□□□□ -2.03
CXCL12P48061 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL12P48061 AL355836.1-201ENST00000555951 870 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL12P48061 AC009163.5-201ENST00000575421 637 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC015688.2-201ENST00000584523 262 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL12P48061 DUXAP4-201ENST00000603046 613 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC068313.1-201ENST00000604028 1008 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC024257.5-201ENST00000612739 531 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC023158.2-201ENST00000614876 543 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC092650.2-201ENST00000619984 902 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 AC120349.2-201ENST00000625002 298 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 MTND5P6-201ENST00000422338 1798 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CXCL12P48061 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL12P48061 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CXCL12P48061 AC002543.1-201ENST00000299783 1954 ntBASIC2.4□□□□□ -2.03
CXCL12P48061 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CXCL12P48061 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CXCL12P48061 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CXCL12P48061 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CXCL12P48061 RNU6-216P-201ENST00000363282 104 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CXCL12P48061 AL079342.1-201ENST00000401460 267 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 RNU6-1077P-201ENST00000410506 102 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.39□□□□□ -2.03
CXCL12P48061 MTND4LP10-201ENST00000435146 291 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC092427.1-201ENST00000439177 601 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AL358794.1-201ENST00000445689 381 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.39□□□□□ -2.03
CXCL12P48061 RPL23AP20-201ENST00000447965 421 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 RPL39P6-201ENST00000448289 150 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 MTND2P19-201ENST00000449129 1012 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.39□□□□□ -2.03
CXCL12P48061 USP9YP34-201ENST00000453983 808 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 RFC5P1-201ENST00000454419 874 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC103975.1-201ENST00000482506 483 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 RPL36AP51-201ENST00000487216 318 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC113347.3-201ENST00000509113 148 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC107222.1-201ENST00000510899 637 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.39□□□□□ -2.03
CXCL12P48061 HSPE1P18-201ENST00000517602 280 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC021451.1-201ENST00000523498 1129 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.39□□□□□ -2.03
CXCL12P48061 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.39□□□□□ -2.03
CXCL12P48061 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.39□□□□□ -2.03
CXCL12P48061 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.39□□□□□ -2.03
CXCL12P48061 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.39□□□□□ -2.03
CXCL12P48061 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms