Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 SNORD115-7-201ENST00000365306 82 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 Y_RNA.339-201ENST00000365325 102 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 RNU6-61P-201ENST00000365528 109 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 Y_RNA.414-201ENST00000384011 101 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 RNU6-738P-201ENST00000384531 106 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMNB1P20700 RNU6-1304P-201ENST00000411374 106 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.32□□□□□ -1.56
LMNB1P20700 GPM6BP2-201ENST00000432046 144 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 GPM6BP1-201ENST00000446387 144 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 AC010655.1-201ENST00000449336 292 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.32□□□□□ -1.56
LMNB1P20700 AC005741.1-201ENST00000511094 432 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 RNA5SP497-201ENST00000516081 97 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 RNU6-559P-201ENST00000516151 98 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 RNA5SP519-201ENST00000516480 119 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 SNORA25.17-201ENST00000517184 124 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.32□□□□□ -1.56
LMNB1P20700 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.32□□□□□ -1.56
LMNB1P20700 NCAPGP2-201ENST00000557911 754 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 CYCSP40-201ENST00000575927 294 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 MIR4512-201ENST00000583257 77 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 AL606490.9-201ENST00000603331 271 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 SRGNP1-201ENST00000603392 451 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 AL390240.1-201ENST00000612950 384 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.32□□□□□ -1.56
LMNB1P20700 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.32□□□□□ -1.56
LMNB1P20700 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMNB1P20700 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.32□□□□□ -1.56
LMNB1P20700 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMNB1P20700 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.32□□□□□ -1.56
LMNB1P20700 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMNB1P20700 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.32□□□□□ -1.56
LMNB1P20700 AC107068.1-201ENST00000563286 4218 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LMNB1P20700 AC087190.4-201ENST00000574616 8334 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMNB1P20700 SNORA63C-201ENST00000364578 129 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 Y_RNA.315-201ENST00000365117 102 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 MIR606-201ENST00000384851 96 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMNB1P20700 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMNB1P20700 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LMNB1P20700 AL590704.1-201ENST00000402856 794 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AC092447.6-201ENST00000414578 210 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 OR6C66P-201ENST00000414917 930 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 RPL36AP10-201ENST00000421785 322 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 RPS12P5-201ENST00000423449 371 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.31□□□□□ -1.56
LMNB1P20700 GTF2IP13-201ENST00000438487 386 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.31□□□□□ -1.56
LMNB1P20700 FGF7P3-201ENST00000454645 303 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 Y_RNA.639-201ENST00000458981 102 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 RNA5SP103-201ENST00000459503 118 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 RNU6-1208P-201ENST00000459588 107 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AC090686.1-201ENST00000481577 749 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.31□□□□□ -1.56
LMNB1P20700 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
LMNB1P20700 KLHL2P1-201ENST00000508691 521 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AL592156.1-201ENST00000508758 304 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 SNORA74D-201ENST00000516404 141 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 DEFB108D-201ENST00000527787 222 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.31□□□□□ -1.56
LMNB1P20700 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.31□□□□□ -1.56
LMNB1P20700 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.31□□□□□ -1.56
LMNB1P20700 SNRPGP17-201ENST00000603780 214 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AL670379.11-201ENST00000604059 253 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AL670379.10-201ENST00000604330 253 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 APOOP1-201ENST00000604695 592 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AL670379.12-201ENST00000605291 253 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AL670379.9-201ENST00000605428 253 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AC012443.1-201ENST00000605605 231 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AL008729.2-201ENST00000606393 473 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AL022345.1-201ENST00000607292 135 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.31□□□□□ -1.56
LMNB1P20700 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LMNB1P20700 AC025034.2-201ENST00000623264 286 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 AP001642.1-201ENST00000624727 2117 ntBASIC5.31□□□□□ -1.56
LMNB1P20700 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMNB1P20700 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LMNB1P20700 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMNB1P20700 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.31□□□□□ -1.56
LMNB1P20700 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LMNB1P20700 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LMNB1P20700 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMNB1P20700 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LMNB1P20700 MTND4P27-201ENST00000450813 1354 ntBASIC5.3□□□□□ -1.56
LMNB1P20700 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LMNB1P20700 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
LMNB1P20700 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LMNB1P20700 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMNB1P20700 RNA5SP124-201ENST00000362739 110 ntBASIC5.3□□□□□ -1.56
LMNB1P20700 SNORA73.2-201ENST00000364946 201 ntBASIC5.3□□□□□ -1.56
LMNB1P20700 Y_RNA.493-201ENST00000384422 102 ntBASIC5.3□□□□□ -1.56
LMNB1P20700 Y_RNA.530-201ENST00000384587 101 ntBASIC5.3□□□□□ -1.56
LMNB1P20700 Y_RNA.576-201ENST00000384781 102 ntBASIC5.3□□□□□ -1.56
LMNB1P20700 AL359643.1-201ENST00000404109 423 ntBASIC5.3□□□□□ -1.56
LMNB1P20700 RNA5SP36-201ENST00000410197 133 ntBASIC5.3□□□□□ -1.56
LMNB1P20700 RNU6-516P-201ENST00000411381 104 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms