Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATF4P18848 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.46□□□□□ -1.7
ATF4P18848 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATF4P18848 Y_RNA.138-201ENST00000363462 102 ntBASIC4.46□□□□□ -1.7
ATF4P18848 RNU6-384P-201ENST00000364900 104 ntBASIC4.46□□□□□ -1.7
ATF4P18848 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
ATF4P18848 SNORA75.4-201ENST00000391278 119 ntBASIC4.46□□□□□ -1.7
ATF4P18848 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.46□□□□□ -1.7
ATF4P18848 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.46□□□□□ -1.7
ATF4P18848 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.46□□□□□ -1.7
ATF4P18848 RPL21P91-201ENST00000429231 479 ntBASIC4.46□□□□□ -1.7
ATF4P18848 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.46□□□□□ -1.7
ATF4P18848 RHOT1P3-201ENST00000436571 331 ntBASIC4.46□□□□□ -1.7
ATF4P18848 HIGD1AP11-201ENST00000438361 280 ntBASIC4.46□□□□□ -1.7
ATF4P18848 AC073465.2-201ENST00000440938 498 ntBASIC4.46□□□□□ -1.7
ATF4P18848 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.46□□□□□ -1.7
ATF4P18848 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.46□□□□□ -1.7
ATF4P18848 RPL23AP24-201ENST00000458203 385 ntBASIC4.46□□□□□ -1.7
ATF4P18848 AC098847.1-201ENST00000473094 348 ntBASIC4.46□□□□□ -1.7
ATF4P18848 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATF4P18848 AL135752.1-201ENST00000479477 471 ntBASIC4.46□□□□□ -1.7
ATF4P18848 HMGN1P11-201ENST00000508668 303 ntBASIC4.46□□□□□ -1.7
ATF4P18848 MTCYBP40-201ENST00000509390 1135 ntBASIC4.46□□□□□ -1.7
ATF4P18848 AC093303.1-201ENST00000514549 295 ntBASIC4.46□□□□□ -1.7
ATF4P18848 RN7SKP35-201ENST00000517210 151 ntBASIC4.46□□□□□ -1.7
ATF4P18848 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.46□□□□□ -1.7
ATF4P18848 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.46□□□□□ -1.7
ATF4P18848 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.46□□□□□ -1.7
ATF4P18848 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.46□□□□□ -1.7
ATF4P18848 AP000769.2-201ENST00000602344 396 ntBASIC4.46□□□□□ -1.7
ATF4P18848 NANOGP3-201ENST00000605855 286 ntBASIC4.46□□□□□ -1.7
ATF4P18848 AC019193.3-201ENST00000609144 554 ntBASIC4.46□□□□□ -1.7
ATF4P18848 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATF4P18848 AL161423.1-201ENST00000613700 262 ntBASIC4.46□□□□□ -1.7
ATF4P18848 AC098657.3-201ENST00000620434 263 ntBASIC4.46□□□□□ -1.7
ATF4P18848 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.46□□□□□ -1.7
ATF4P18848 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.46□□□□□ -1.7
ATF4P18848 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATF4P18848 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATF4P18848 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
ATF4P18848 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATF4P18848 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATF4P18848 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.46□□□□□ -1.7
ATF4P18848 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.45□□□□□ -1.7
ATF4P18848 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
ATF4P18848 KPNA2P1-201ENST00000458289 1591 ntBASIC4.45□□□□□ -1.7
ATF4P18848 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATF4P18848 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATF4P18848 AC006206.1-201ENST00000544842 3387 ntBASIC4.45□□□□□ -1.7
ATF4P18848 RNU6-166P-201ENST00000384371 107 ntBASIC4.45□□□□□ -1.7
ATF4P18848 SNORD73A-201ENST00000386062 65 ntBASIC4.45□□□□□ -1.7
ATF4P18848 RNU6-328P-201ENST00000390887 106 ntBASIC4.45□□□□□ -1.7
ATF4P18848 SNORA48.4-201ENST00000391089 134 ntBASIC4.45□□□□□ -1.7
ATF4P18848 RN7SKP126-201ENST00000411143 300 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.45□□□□□ -1.7
ATF4P18848 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.45□□□□□ -1.7
ATF4P18848 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.45□□□□□ -1.7
ATF4P18848 HMGN2P30-201ENST00000423237 256 ntBASIC4.45□□□□□ -1.7
ATF4P18848 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.45□□□□□ -1.7
ATF4P18848 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATF4P18848 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.45□□□□□ -1.7
ATF4P18848 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.45□□□□□ -1.7
ATF4P18848 ELOCP24-201ENST00000456370 334 ntBASIC4.45□□□□□ -1.7
ATF4P18848 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AC008638.1-201ENST00000506035 866 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AC105384.2-201ENST00000508433 640 ntBASIC4.45□□□□□ -1.7
ATF4P18848 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATF4P18848 AP000648.1-201ENST00000529682 397 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AP003072.1-201ENST00000531740 145 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AC079905.1-201ENST00000549280 475 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.45□□□□□ -1.7
ATF4P18848 AC084783.1-201ENST00000565846 910 ntBASIC4.45□□□□□ -1.7
ATF4P18848 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.45□□□□□ -1.7
ATF4P18848 AC018462.2-201ENST00000605375 395 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AL080274.1-201ENST00000605565 220 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AL136131.3-201ENST00000607600 188 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.45□□□□□ -1.7
ATF4P18848 AF117829.1-206ENST00000621883 3802 ntBASIC4.45□□□□□ -1.7
ATF4P18848 AL669831.3-213ENST00000636676 183 ntBASIC4.45□□□□□ -1.7
ATF4P18848 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
ATF4P18848 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.45□□□□□ -1.7
ATF4P18848 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATF4P18848 MTCO1P12-201ENST00000414273 1543 ntBASIC4.45□□□□□ -1.7
ATF4P18848 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATF4P18848 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.45□□□□□ -1.7
ATF4P18848 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
ATF4P18848 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.45□□□□□ -1.7
ATF4P18848 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.45□□□□□ -1.7
ATF4P18848 AC068870.1-201ENST00000563737 2455 ntBASIC4.45□□□□□ -1.7
ATF4P18848 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATF4P18848 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms