Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MOB1AP2-201ENST00000446060 614 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A1P02462 RNU4-60P-201ENST00000517239 135 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 AC026616.1-201ENST00000523157 525 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 SYF2P1-201ENST00000550658 413 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 MIR3690-201ENST00000580266 75 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 AL049779.4-201ENST00000604500 156 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 AC004775.1-201ENST00000607389 753 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 AC006249.1-201ENST00000621223 471 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A1P02462 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL4A1P02462 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL4A1P02462 AC002546.1-201ENST00000588041 2504 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
COL4A1P02462 HNRNPDP2-201ENST00000406475 478 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.84□□□□□ -2.11
COL4A1P02462 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A1P02462 AL354695.1-201ENST00000427935 228 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
COL4A1P02462 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A1P02462 PIGFP3-201ENST00000441918 722 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A1P02462 MTND2P6-201ENST00000455337 1030 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 AC092798.1-201ENST00000458542 409 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 RPL21P104-201ENST00000464143 478 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A1P02462 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A1P02462 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A1P02462 AC103833.1-201ENST00000517442 172 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.84□□□□□ -2.11
COL4A1P02462 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A1P02462 AP000790.1-201ENST00000528891 737 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 AC087441.2-201ENST00000529141 262 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A1P02462 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A1P02462 AC113368.1-201ENST00000603736 382 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 AC069304.3-201ENST00000603938 1084 ntBASIC1.84□□□□□ -2.11
COL4A1P02462 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A1P02462 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL4A1P02462 RNU6-707P-201ENST00000364647 95 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 SNORD115-48-201ENST00000364764 76 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A1P02462 RNU6-356P-201ENST00000384140 107 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 HMGB3P31-201ENST00000413333 595 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A1P02462 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A1P02462 AC090774.1-201ENST00000435925 246 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AL691517.1-201ENST00000440833 1235 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AL500527.1-201ENST00000448532 255 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A1P02462 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A1P02462 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A1P02462 MTCO2P32-201ENST00000514865 403 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A1P02462 C1DP5-201ENST00000525775 383 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A1P02462 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 YWHAQP7-201ENST00000603536 658 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AP003072.4-201ENST00000624580 310 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A1P02462 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A1P02462 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL4A1P02462 RNU6-1005P-201ENST00000384519 107 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 UBE2V1P15-201ENST00000407776 448 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A1P02462 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A1P02462 ARL2BPP3-201ENST00000421226 480 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A1P02462 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A1P02462 AL513321.1-201ENST00000441175 761 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 RPL17P49-201ENST00000443728 411 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A1P02462 AL035407.2-201ENST00000454090 378 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AC146507.1-201ENST00000468335 354 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 OR52A4P-202ENST00000481634 799 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 RPL30P11-201ENST00000495304 339 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A1P02462 SNORA31.13-201ENST00000516624 135 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A1P02462 IGLV3-17-201ENST00000519099 244 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A1P02462 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A1P02462 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A1P02462 LLPHP1-201ENST00000603571 367 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AC135178.6-201ENST00000605314 398 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AP001033.2-201ENST00000609701 1003 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 RMST_2.1-201ENST00000617263 136 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 U6.48-201ENST00000618523 106 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 AC073569.3-201ENST00000619055 682 ntBASIC1.83□□□□□ -2.12
COL4A1P02462 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
COL4A1P02462 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A1P02462 MIR96-201ENST00000362288 78 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 SNORA7.1-201ENST00000363750 139 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A1P02462 HSPE1P1-201ENST00000421494 318 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A1P02462 MTCO3P43-201ENST00000440974 771 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 TPTE2P6-202ENST00000445572 1007 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms