Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR6075-201ENST00000620782 95 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MIR622-201ENST00000638396 96 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AP000526.1-201ENST00000603308 1388 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 MIR26A1-201ENST00000362205 77 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 SNORA71.3-201ENST00000362582 128 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 RNU6-270P-201ENST00000364131 105 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 SNORA4.1-201ENST00000364263 144 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 RNU1-39P-201ENST00000383897 165 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 RNU6-637P-201ENST00000384050 107 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 MIR325-201ENST00000385260 98 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 MIR320C1-201ENST00000408566 88 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 HMGN2P35-201ENST00000412164 270 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 NDUFB4P7-201ENST00000423198 363 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 SNRPEP7-201ENST00000438350 220 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AL591503.2-201ENST00000442314 1005 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 UBBP3-201ENST00000445497 241 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AL358232.1-201ENST00000448030 501 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AL162389.1-201ENST00000449233 177 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AL135752.1-201ENST00000479477 471 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 HSPE1P23-201ENST00000509838 286 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 RNU6-928P-201ENST00000516876 104 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 MTCO2P15-201ENST00000532655 656 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 HPRT1P3-201ENST00000539521 576 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AC005951.2-201ENST00000576282 495 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 MIR3609-201ENST00000582661 80 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 GLUD1P4-201ENST00000590914 418 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 CKS1BP3-201ENST00000600888 237 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AL606834.2-201ENST00000602954 668 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 SRGNP1-201ENST00000603392 451 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AL592221.1-201ENST00000605266 382 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AC027449.1-201ENST00000608890 407 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 OR8B1P-202ENST00000641132 1178 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 ZNF876P-202ENST00000398732 1485 ntBASIC2.13□□□□□ -2.07
HLA-DQA1P01909 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
HLA-DQA1P01909 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC092447.10-201ENST00000620607 1652 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 MTND5P1-201ENST00000445440 1375 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 SNORA9.2-201ENST00000365361 133 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 RNU6-157P-201ENST00000383957 107 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC234781.2-201ENST00000426370 994 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AL445669.1-201ENST00000426743 755 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC008850.1-201ENST00000427546 362 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 TAAR7P-201ENST00000436141 242 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 CR769776.1-201ENST00000441254 787 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC009237.8-201ENST00000445492 379 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 Z96811.1-201ENST00000445880 108 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 PAXBP1P1-201ENST00000449315 447 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AL109741.2-201ENST00000455561 343 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 RN7SL863P-201ENST00000462370 296 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 RPL30P5-201ENST00000494923 336 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 RNU6-1256P-201ENST00000516539 103 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC025881.1-201ENST00000518851 512 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 MTND2P32-201ENST00000521584 1038 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms