Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AP004247.1-201ENST00000531556 1289 ntBASIC3.85□□□□□ -1.79
DDX58O95786 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX58O95786 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX58O95786 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.85□□□□□ -1.79
DDX58O95786 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX58O95786 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX58O95786 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.85□□□□□ -1.79
DDX58O95786 AC060771.1-201ENST00000582031 164 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AC105224.1-201ENST00000587055 421 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AC107214.2-201ENST00000608204 634 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AL360219.1-201ENST00000610230 366 ntBASIC3.85□□□□□ -1.79
DDX58O95786 XIST_intron.1-201ENST00000619444 68 ntBASIC3.85□□□□□ -1.79
DDX58O95786 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX58O95786 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX58O95786 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX58O95786 CUL1P1-201ENST00000509510 2425 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AC138915.3-201ENST00000562908 1389 ntBASIC3.85□□□□□ -1.79
DDX58O95786 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX58O95786 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX58O95786 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
DDX58O95786 RNA5SP383-201ENST00000362934 120 ntBASIC3.84□□□□□ -1.79
DDX58O95786 U3.11-201ENST00000364476 212 ntBASIC3.84□□□□□ -1.79
DDX58O95786 Y_RNA.560-201ENST00000384689 102 ntBASIC3.84□□□□□ -1.79
DDX58O95786 RNU4-72P-201ENST00000410754 173 ntBASIC3.84□□□□□ -1.79
DDX58O95786 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX58O95786 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX58O95786 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX58O95786 AC090774.1-201ENST00000435925 246 ntBASIC3.84□□□□□ -1.79
DDX58O95786 RPL26P6-201ENST00000440913 438 ntBASIC3.84□□□□□ -1.79
DDX58O95786 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX58O95786 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX58O95786 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX58O95786 AC092754.2-201ENST00000463506 460 ntBASIC3.84□□□□□ -1.79
DDX58O95786 BZW1P2-201ENST00000473537 826 ntBASIC3.84□□□□□ -1.79
DDX58O95786 RPL31P60-201ENST00000478450 367 ntBASIC3.84□□□□□ -1.79
DDX58O95786 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX58O95786 HIGD1AP10-201ENST00000527837 282 ntBASIC3.84□□□□□ -1.79
DDX58O95786 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX58O95786 AL109653.1-201ENST00000603091 248 ntBASIC3.84□□□□□ -1.79
DDX58O95786 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.84□□□□□ -1.79
DDX58O95786 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX58O95786 AC092192.1-201ENST00000633154 1018 ntBASIC3.84□□□□□ -1.79
DDX58O95786 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
DDX58O95786 AC099063.3-201ENST00000642066 185 ntBASIC3.84□□□□□ -1.79
DDX58O95786 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX58O95786 AC090740.1-201ENST00000623193 2262 ntBASIC3.84□□□□□ -1.79
DDX58O95786 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.84□□□□□ -1.8
DDX58O95786 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
DDX58O95786 DDX10P1-201ENST00000448545 1933 ntBASIC3.83□□□□□ -1.8
DDX58O95786 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX58O95786 AC073325.2-201ENST00000339545 159 ntBASIC3.83□□□□□ -1.8
DDX58O95786 RNU6-432P-201ENST00000384196 109 ntBASIC3.83□□□□□ -1.8
DDX58O95786 AL359704.1-201ENST00000411586 781 ntBASIC3.83□□□□□ -1.8
DDX58O95786 TPMTP3-201ENST00000411928 735 ntBASIC3.83□□□□□ -1.8
DDX58O95786 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX58O95786 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX58O95786 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX58O95786 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX58O95786 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX58O95786 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX58O95786 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX58O95786 OR6K1P-201ENST00000456766 971 ntBASIC3.83□□□□□ -1.8
DDX58O95786 AC117440.1-201ENST00000474107 571 ntBASIC3.83□□□□□ -1.8
DDX58O95786 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX58O95786 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX58O95786 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX58O95786 MRPS36P5-201ENST00000551909 298 ntBASIC3.83□□□□□ -1.8
DDX58O95786 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX58O95786 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX58O95786 MIR5047-201ENST00000579212 100 ntBASIC3.83□□□□□ -1.8
DDX58O95786 LARP7P3-201ENST00000579888 337 ntBASIC3.83□□□□□ -1.8
DDX58O95786 MIR544B-201ENST00000582372 78 ntBASIC3.83□□□□□ -1.8
DDX58O95786 AC122133.1-201ENST00000613964 233 ntBASIC3.83□□□□□ -1.8
DDX58O95786 AC006111.3-201ENST00000622137 383 ntBASIC3.83□□□□□ -1.8
DDX58O95786 AC019226.2-201ENST00000625973 424 ntBASIC3.83□□□□□ -1.8
DDX58O95786 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
DDX58O95786 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX58O95786 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
DDX58O95786 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX58O95786 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX58O95786 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
DDX58O95786 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX58O95786 AC008568.2-201ENST00000623862 2313 ntBASIC3.83□□□□□ -1.8
DDX58O95786 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX58O95786 AC091152.2-201ENST00000591628 2569 ntBASIC3.83□□□□□ -1.8
DDX58O95786 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX58O95786 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.82□□□□□ -1.8
DDX58O95786 AC011460.1-201ENST00000636268 1834 ntBASIC3.82□□□□□ -1.8
DDX58O95786 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DDX58O95786 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DDX58O95786 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
DDX58O95786 SNORD56.3-201ENST00000363507 71 ntBASIC3.82□□□□□ -1.8
DDX58O95786 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.82□□□□□ -1.8
DDX58O95786 MIR634-201ENST00000385208 97 ntBASIC3.82□□□□□ -1.8
DDX58O95786 RPL5P18-201ENST00000406671 891 ntBASIC3.82□□□□□ -1.8
DDX58O95786 U3.42-201ENST00000408746 214 ntBASIC3.82□□□□□ -1.8
DDX58O95786 MTND1P21-201ENST00000412991 285 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AC107081.1-201ENST00000414975 361 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.82□□□□□ -1.8
DDX58O95786 VPS26BP1-201ENST00000417155 755 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms