Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR1250-201ENST00000408098 113 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCD1O75127 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.77□□□□□ -1.49
PTCD1O75127 RPL31P12-201ENST00000422587 358 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 REREP1Y-201ENST00000422655 198 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 CKS1BP6-201ENST00000424932 240 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCD1O75127 REREP2Y-201ENST00000439103 200 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCD1O75127 HMGB1P25-201ENST00000468402 607 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCD1O75127 AC098591.2-201ENST00000510152 315 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 RNU6-764P-201ENST00000516396 105 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 HMGB1P19-201ENST00000517578 577 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCD1O75127 AC006254.3-201ENST00000603353 884 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCD1O75127 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCD1O75127 AC103705.1-201ENST00000619013 241 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCD1O75127 DDX10P1-201ENST00000448545 1933 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 PABPC1P7-201ENST00000413177 1513 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCD1O75127 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCD1O75127 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCD1O75127 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCD1O75127 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCD1O75127 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PTCD1O75127 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCD1O75127 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCD1O75127 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PTCD1O75127 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
PTCD1O75127 MTND5P19-201ENST00000424872 1794 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCD1O75127 RNU6-263P-201ENST00000363811 107 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 Y_RNA.212-201ENST00000364177 102 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 SMIM11P1-201ENST00000369586 178 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 Y_RNA.482-201ENST00000384377 111 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 RNU6-1127P-201ENST00000384580 107 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 RNU6-178P-201ENST00000384631 104 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 MIR23B-201ENST00000384832 97 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 AL022722.2-201ENST00000402519 180 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
PTCD1O75127 VDAC1P9-201ENST00000412766 841 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCD1O75127 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.76□□□□□ -1.49
PTCD1O75127 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCD1O75127 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCD1O75127 RPL23AP52-201ENST00000439311 478 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCD1O75127 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCD1O75127 RNA5SP230-201ENST00000517039 122 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 RN7SKP40-201ENST00000517211 242 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 RANP9-201ENST00000519957 271 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 AC100870.1-201ENST00000522035 505 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCD1O75127 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCD1O75127 RPL23AP84-201ENST00000571193 464 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 AC023043.2-201ENST00000589678 1026 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCD1O75127 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCD1O75127 AC012409.4-201ENST00000612923 249 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 AC133104.2-201ENST00000615272 193 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 AC078938.1-201ENST00000620993 318 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 AL445363.3-201ENST00000623080 671 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 AC008013.2-202ENST00000637965 364 ntBASIC5.76□□□□□ -1.49
PTCD1O75127 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCD1O75127 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCD1O75127 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTCD1O75127 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCD1O75127 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCD1O75127 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCD1O75127 AL158163.1-201ENST00000603915 1649 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 SPRR2C-201ENST00000290702 219 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 Y_RNA.158-201ENST00000363651 101 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 RN7SKP280-201ENST00000364196 304 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 UBBP2-201ENST00000376781 231 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 SNORD116-11-201ENST00000383882 92 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 RNU6-701P-201ENST00000384059 107 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 RNA5SP187-201ENST00000384400 119 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 MIR450B-201ENST00000401182 78 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 RNU4-78P-201ENST00000410940 126 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 RNA5SP111-201ENST00000411386 101 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCD1O75127 SKA2P1-201ENST00000425592 390 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCD1O75127 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCD1O75127 RPL21P112-201ENST00000434403 463 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 AF228730.2-201ENST00000438784 848 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 AL162389.1-201ENST00000449233 177 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 AC012671.1-201ENST00000451912 203 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCD1O75127 ELOCP24-201ENST00000456370 334 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 MIR2053-201ENST00000459295 91 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 AC010631.1-201ENST00000474150 156 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 AC104564.1-201ENST00000493028 407 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 HMGB3P17-201ENST00000504195 649 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 AP003385.6-201ENST00000531603 374 ntBASIC5.75□□□□□ -1.49
PTCD1O75127 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms