Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CACNA1FO60840 RNU6-356P-201ENST00000384140 107 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CACNA1FO60840 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CACNA1FO60840 RPS15AP38-201ENST00000413110 372 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.35□□□□□ -1.87
CACNA1FO60840 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.35□□□□□ -1.87
CACNA1FO60840 SEPT7P5-201ENST00000434048 306 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CACNA1FO60840 HMGB3P30-201ENST00000457863 606 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.35□□□□□ -1.87
CACNA1FO60840 RNA5SP320-201ENST00000516263 124 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 RNU6-678P-201ENST00000516832 109 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.35□□□□□ -1.87
CACNA1FO60840 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.35□□□□□ -1.87
CACNA1FO60840 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.35□□□□□ -1.87
CACNA1FO60840 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.35□□□□□ -1.87
CACNA1FO60840 AC091805.2-201ENST00000603848 235 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 AC007684.1-201ENST00000609671 477 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 AC007014.2-201ENST00000615581 479 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 AC019226.1-201ENST00000625666 515 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.35□□□□□ -1.87
CACNA1FO60840 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CACNA1FO60840 AC116096.1-201ENST00000566804 2314 ntBASIC3.35□□□□□ -1.87
CACNA1FO60840 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CACNA1FO60840 RNU6-374P-201ENST00000364146 108 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 DEFB108C-201ENST00000400154 252 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CACNA1FO60840 RAD23BP2-201ENST00000416003 1207 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 AC093151.1-201ENST00000427711 313 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 RPS26P30-201ENST00000443431 335 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 GAPDHP27-201ENST00000447427 1020 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 RNU6-956P-201ENST00000458868 103 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CACNA1FO60840 RN7SL283P-201ENST00000489055 303 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.34□□□□□ -1.87
CACNA1FO60840 RNU6-314P-201ENST00000516574 104 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.34□□□□□ -1.87
CACNA1FO60840 OR4C2P-201ENST00000530855 1064 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.34□□□□□ -1.87
CACNA1FO60840 HIGD1AP17-201ENST00000554576 276 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 MTCO3P13-201ENST00000577757 781 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 MIR4458-201ENST00000578872 75 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 MIR5092-201ENST00000583139 88 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 AC108747.1-201ENST00000609508 535 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 AC022306.2-201ENST00000617563 647 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.34□□□□□ -1.87
CACNA1FO60840 AC005539.1-201ENST00000443768 1479 ntBASIC3.34□□□□□ -1.87
CACNA1FO60840 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.34□□□□□ -1.87
CACNA1FO60840 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CACNA1FO60840 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CACNA1FO60840 RNU6-867P-201ENST00000364956 107 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 RNU6-1119P-201ENST00000384349 108 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 MIR181A2-201ENST00000384863 110 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 RNU2-16P-201ENST00000410712 136 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CACNA1FO60840 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.34□□□□□ -1.88
CACNA1FO60840 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.34□□□□□ -1.88
CACNA1FO60840 NF1P3-201ENST00000457709 450 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 AC146507.1-201ENST00000468335 354 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 AC126389.1-201ENST00000477436 290 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 SNX5P1-201ENST00000505757 1041 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
CACNA1FO60840 MTCO1P30-201ENST00000515244 580 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 RNY4P37-201ENST00000516225 96 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 RNA5SP76-201ENST00000516277 87 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.34□□□□□ -1.88
CACNA1FO60840 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CACNA1FO60840 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.34□□□□□ -1.88
CACNA1FO60840 TRAV37-201ENST00000553906 342 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.34□□□□□ -1.88
CACNA1FO60840 AC008277.2-201ENST00000605196 797 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 AC098614.4-201ENST00000607601 462 ntBASIC3.34□□□□□ -1.88
CACNA1FO60840 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CACNA1FO60840 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.34□□□□□ -1.88
CACNA1FO60840 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
CACNA1FO60840 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1FO60840 PABPC1P9-201ENST00000426076 1612 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1FO60840 FGF7P2-201ENST00000332473 296 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.33□□□□□ -1.88
CACNA1FO60840 MIR16-1-201ENST00000385271 89 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 RPL23AP47-201ENST00000408017 460 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.33□□□□□ -1.88
CACNA1FO60840 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1FO60840 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.33□□□□□ -1.88
CACNA1FO60840 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.33□□□□□ -1.88
CACNA1FO60840 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.33□□□□□ -1.88
CACNA1FO60840 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.33□□□□□ -1.88
CACNA1FO60840 AL133241.1-201ENST00000556832 487 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1FO60840 BNIP3P30-201ENST00000601184 574 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 AC116312.1-201ENST00000606841 314 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 AC069234.5-201ENST00000611056 416 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1FO60840 CRYM-AS1-204ENST00000637983 556 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 MKKS-204ENST00000639674 192 ntBASIC3.33□□□□□ -1.88
CACNA1FO60840 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.33□□□□□ -1.88
CACNA1FO60840 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms