Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
MSH5O43196 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MSH5O43196 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
MSH5O43196 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC9.03□□□□□ -0.96
MSH5O43196 HCG14-201ENST00000444986 413 ntTSL 2 BASIC9.03□□□□□ -0.96
MSH5O43196 AL121578.2-201ENST00000448797 447 ntBASIC9.03□□□□□ -0.96
MSH5O43196 AC090255.1-201ENST00000495779 349 ntBASIC9.03□□□□□ -0.96
MSH5O43196 AC146944.3-201ENST00000509969 371 ntBASIC9.03□□□□□ -0.96
MSH5O43196 RNU6-240P-201ENST00000516098 97 ntBASIC9.03□□□□□ -0.96
MSH5O43196 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC9.03□□□□□ -0.96
MSH5O43196 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC9.03□□□□□ -0.96
MSH5O43196 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC9.03□□□□□ -0.96
MSH5O43196 AL365205.2-201ENST00000594586 68 ntBASIC9.03□□□□□ -0.96
MSH5O43196 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC9.03□□□□□ -0.96
MSH5O43196 AC011471.4-201ENST00000638271 216 ntBASIC9.03□□□□□ -0.96
MSH5O43196 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC9.03□□□□□ -0.96
MSH5O43196 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MSH5O43196 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC9.03□□□□□ -0.96
MSH5O43196 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC9.03□□□□□ -0.96
MSH5O43196 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
MSH5O43196 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
MSH5O43196 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC9.03□□□□□ -0.96
MSH5O43196 FAM35CP-201ENST00000554755 2470 ntBASIC9.03□□□□□ -0.96
MSH5O43196 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MSH5O43196 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
MSH5O43196 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
MSH5O43196 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
MSH5O43196 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC9.02□□□□□ -0.97
MSH5O43196 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
MSH5O43196 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
MSH5O43196 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
MSH5O43196 MAPK10-357ENST00000641831 2858 ntBASIC9.02□□□□□ -0.97
MSH5O43196 RNU1-55P-201ENST00000365510 158 ntBASIC9.02□□□□□ -0.97
MSH5O43196 PPIAP20-201ENST00000449839 135 ntBASIC9.02□□□□□ -0.97
MSH5O43196 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC9.02□□□□□ -0.97
MSH5O43196 AC113367.2-201ENST00000505749 160 ntBASIC9.02□□□□□ -0.97
MSH5O43196 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC9.02□□□□□ -0.97
MSH5O43196 AC015914.2-201ENST00000618167 288 ntBASIC9.02□□□□□ -0.97
MSH5O43196 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
MSH5O43196 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC9.02□□□□□ -0.97
MSH5O43196 ADAM24P-201ENST00000398655 2101 ntBASIC9.02□□□□□ -0.97
MSH5O43196 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
MSH5O43196 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
MSH5O43196 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
MSH5O43196 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC9.01□□□□□ -0.97
MSH5O43196 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC9.01□□□□□ -0.97
MSH5O43196 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC9.01□□□□□ -0.97
MSH5O43196 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC9.01□□□□□ -0.97
MSH5O43196 SNORA33-201ENST00000363664 130 ntBASIC9.01□□□□□ -0.97
MSH5O43196 RN7SKP237-201ENST00000364663 301 ntBASIC9.01□□□□□ -0.97
MSH5O43196 RNU6-72P-201ENST00000384285 79 ntBASIC9.01□□□□□ -0.97
MSH5O43196 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC9.01□□□□□ -0.97
MSH5O43196 SNRPGP10-201ENST00000432323 225 ntBASIC9.01□□□□□ -0.97
MSH5O43196 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC9.01□□□□□ -0.97
MSH5O43196 BX323845.2-201ENST00000458382 234 ntBASIC9.01□□□□□ -0.97
MSH5O43196 RPS23P7-201ENST00000466210 444 ntBASIC9.01□□□□□ -0.97
MSH5O43196 AC084121.1-201ENST00000533882 835 ntBASIC9.01□□□□□ -0.97
MSH5O43196 MIR5095-201ENST00000578844 88 ntBASIC9.01□□□□□ -0.97
MSH5O43196 AC091152.3-201ENST00000604227 325 ntBASIC9.01□□□□□ -0.97
MSH5O43196 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC9.01□□□□□ -0.97
MSH5O43196 MIR6721-201ENST00000617181 87 ntBASIC9.01□□□□□ -0.97
MSH5O43196 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 TATDN2P3-201ENST00000452855 3665 ntBASIC9.01□□□□□ -0.97
MSH5O43196 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MSH5O43196 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC9.01□□□□□ -0.97
MSH5O43196 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC9□□□□□ -0.97
MSH5O43196 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC9□□□□□ -0.97
MSH5O43196 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC9□□□□□ -0.97
MSH5O43196 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
MSH5O43196 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MSH5O43196 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MSH5O43196 RNU1-62P-201ENST00000362599 164 ntBASIC9□□□□□ -0.97
MSH5O43196 RNU6-799P-201ENST00000363567 107 ntBASIC9□□□□□ -0.97
MSH5O43196 RNU6-60P-201ENST00000364792 103 ntBASIC9□□□□□ -0.97
MSH5O43196 RN7SL221P-201ENST00000466190 281 ntBASIC9□□□□□ -0.97
MSH5O43196 MLLT10P2-201ENST00000506434 249 ntBASIC9□□□□□ -0.97
MSH5O43196 IGHV7-34-1-201ENST00000519200 350 ntBASIC9□□□□□ -0.97
MSH5O43196 AC090022.1-201ENST00000546569 311 ntBASIC9□□□□□ -0.97
MSH5O43196 OR1E3-201ENST00000575608 948 ntBASIC9□□□□□ -0.97
MSH5O43196 PACRG-210ENST00000611387 279 ntTSL 5 BASIC9□□□□□ -0.97
MSH5O43196 AC022400.9-201ENST00000623633 273 ntBASIC9□□□□□ -0.97
MSH5O43196 AP001052.1-201ENST00000626421 99 ntBASIC9□□□□□ -0.97
MSH5O43196 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC9□□□□□ -0.97
MSH5O43196 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MSH5O43196 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MSH5O43196 PRNCR1-201ENST00000635449 12727 ntBASIC9□□□□□ -0.97
MSH5O43196 AL591848.4-201ENST00000567832 3472 ntBASIC9□□□□□ -0.97
MSH5O43196 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
MSH5O43196 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
MSH5O43196 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms