Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AL136164.3-201ENST00000624429 3978 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 Y_RNA.378-201ENST00000365652 113 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 MIR514A2-201ENST00000385131 88 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 MIR514A3-201ENST00000385132 88 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 MIR514A1-201ENST00000385133 98 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 HSPE1P26-201ENST00000405341 275 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 RNU6-1148P-201ENST00000410992 104 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 PDCL2P1-201ENST00000419302 352 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 RPL37P6-201ENST00000460682 294 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 VN1R17P-201ENST00000472048 1090 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 RPL23AP11-201ENST00000475260 469 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 TRBV1-201ENST00000476502 284 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AL359273.1-201ENST00000510918 627 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 RNU4-49P-201ENST00000516080 140 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AC105031.1-201ENST00000518550 476 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AP000763.2-201ENST00000540641 163 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AL118558.2-201ENST00000556294 238 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AC006130.2-201ENST00000586202 326 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AC005261.5-201ENST00000596280 355 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AL117336.2-201ENST00000602435 335 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AC174048.1-201ENST00000603389 144 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 AC022893.3-201ENST00000607665 437 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 DUSP12P1-201ENST00000612874 516 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC163A0A0D9SF12 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 LARP1BP1-201ENST00000506036 1359 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AL359837.1-201ENST00000381357 287 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AL122016.1-201ENST00000403365 367 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC007738.1-201ENST00000413892 348 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 BX842559.1-201ENST00000419615 532 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AL451054.2-201ENST00000420896 202 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 ISCUP1-201ENST00000454451 448 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 PPP1R2P5-201ENST00000457256 603 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 Y_RNA.665-201ENST00000516177 98 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 SNORA31.8-201ENST00000516327 108 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 MYL12AP1-201ENST00000518490 515 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC087241.2-201ENST00000535801 324 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 PSMA3P-201ENST00000555485 635 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC022968.1-201ENST00000567372 442 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 RPS3AP23-202ENST00000574601 686 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 RN7SL176P-201ENST00000580352 264 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 MIR4424-201ENST00000585257 86 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC103710.3-201ENST00000608157 948 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 AC092807.2-201ENST00000609367 243 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 uc_338.13-201ENST00000618243 179 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 RMST_7.1-201ENST00000621935 268 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 MTND5P42-201ENST00000637720 498 ntBASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC163A0A0D9SF12 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 MIR383-201ENST00000362257 73 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 SNORA11F-201ENST00000408237 128 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms