Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ARFGEF1Q9Y6D6 MIR1233-2-201ENST00000408138 82 ntBASIC23.38■■□□□ 1.33
ARFGEF1Q9Y6D6 MIR1233-1-201ENST00000408722 82 ntBASIC23.38■■□□□ 1.33
ARFGEF1Q9Y6D6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ARFGEF1Q9Y6D6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ARFGEF1Q9Y6D6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 AC092865.5-201ENST00000545435 363 ntBASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.37■■□□□ 1.33
ARFGEF1Q9Y6D6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.36■■□□□ 1.33
ARFGEF1Q9Y6D6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 MIR3917-201ENST00000580971 93 ntBASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ARFGEF1Q9Y6D6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 AC092183.1-201ENST00000469884 875 ntBASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 MIR7706-201ENST00000613747 67 ntBASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
ARFGEF1Q9Y6D6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ARFGEF1Q9Y6D6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.33■■□□□ 1.33
ARFGEF1Q9Y6D6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ARFGEF1Q9Y6D6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.33■■□□□ 1.33
ARFGEF1Q9Y6D6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ARFGEF1Q9Y6D6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ARFGEF1Q9Y6D6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.33■■□□□ 1.33
ARFGEF1Q9Y6D6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
ARFGEF1Q9Y6D6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ARFGEF1Q9Y6D6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
ARFGEF1Q9Y6D6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.33■■□□□ 1.32
ARFGEF1Q9Y6D6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.33■■□□□ 1.32
ARFGEF1Q9Y6D6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.33■■□□□ 1.32
ARFGEF1Q9Y6D6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ARFGEF1Q9Y6D6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
ARFGEF1Q9Y6D6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 AF238378.1-201ENST00000526806 358 ntBASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 MIR3180-5-201ENST00000583743 153 ntBASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 LINC01711-201ENST00000598340 967 ntBASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms