Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 HOMER2P1-201ENST00000455653 964 ntBASIC17.87■□□□□ 0.45
PCDHGA9Q9Y5G4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.87■□□□□ 0.45
PCDHGA9Q9Y5G4 AL353719.1-201ENST00000566847 864 ntBASIC17.87■□□□□ 0.45
PCDHGA9Q9Y5G4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGA9Q9Y5G4 AL121956.5-201ENST00000625261 221 ntBASIC17.87■□□□□ 0.45
PCDHGA9Q9Y5G4 AC018445.3-201ENST00000624177 1945 ntBASIC17.87■□□□□ 0.45
PCDHGA9Q9Y5G4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA9Q9Y5G4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 TCF3P1-201ENST00000423021 1937 ntBASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGA9Q9Y5G4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA9Q9Y5G4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 AC009947.2-201ENST00000444014 672 ntBASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 AL160286.2-201ENST00000567150 934 ntBASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 AC011558.1-201ENST00000623459 338 ntBASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA9Q9Y5G4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 AC116562.4-201ENST00000641316 2276 ntBASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms