Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LRP1BQ9NZR2 AC073314.1-201ENST00000568729 2216 ntBASIC12.15□□□□□ -0.46
LRP1BQ9NZR2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.15□□□□□ -0.46
LRP1BQ9NZR2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LRP1BQ9NZR2 KRT18P13-201ENST00000400056 1290 ntBASIC12.15□□□□□ -0.46
LRP1BQ9NZR2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.15□□□□□ -0.46
LRP1BQ9NZR2 AC120114.3-201ENST00000611923 658 ntBASIC12.15□□□□□ -0.46
LRP1BQ9NZR2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LRP1BQ9NZR2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LRP1BQ9NZR2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
LRP1BQ9NZR2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.15□□□□□ -0.47
LRP1BQ9NZR2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
LRP1BQ9NZR2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
LRP1BQ9NZR2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.15□□□□□ -0.47
LRP1BQ9NZR2 REXO1L6P-202ENST00000619970 1078 ntBASIC12.15□□□□□ -0.47
LRP1BQ9NZR2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.15□□□□□ -0.47
LRP1BQ9NZR2 AF228730.7-201ENST00000641842 219 ntBASIC12.15□□□□□ -0.47
LRP1BQ9NZR2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 AC034232.1-201ENST00000506026 1064 ntBASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 DRAXINP1-201ENST00000437611 948 ntBASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 KRT8P26-201ENST00000534154 1276 ntBASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC12.14□□□□□ -0.47
LRP1BQ9NZR2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 AL121912.1-201ENST00000603683 238 ntBASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 TSPY22P-201ENST00000427496 604 ntBASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LRP1BQ9NZR2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 AC104417.2-201ENST00000562989 1793 ntBASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 LINC02084-201ENST00000606069 1096 ntBASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LRP1BQ9NZR2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms