Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MIR1224-201ENST00000408193 85 ntBASIC21.13■□□□□ 0.97
RNF39Q9H2S5 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 MTND2P20-201ENST00000440805 661 ntBASIC21.13■□□□□ 0.97
RNF39Q9H2S5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 RCC2P6-201ENST00000526625 1557 ntBASIC21.13■□□□□ 0.97
RNF39Q9H2S5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 LINC01568-207ENST00000641790 1380 ntBASIC21.12■□□□□ 0.97
RNF39Q9H2S5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AC009237.14-201ENST00000609975 1594 ntBASIC21.12■□□□□ 0.97
RNF39Q9H2S5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 MTATP6P31-201ENST00000406985 692 ntBASIC21.12■□□□□ 0.97
RNF39Q9H2S5 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AC005520.3-201ENST00000602874 370 ntBASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 AC084824.4-201ENST00000620106 731 ntBASIC21.12■□□□□ 0.97
RNF39Q9H2S5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF39Q9H2S5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 AL627171.1-201ENST00000618845 1308 ntBASIC21.11■□□□□ 0.97
RNF39Q9H2S5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 BCAS2P3-201ENST00000416374 767 ntBASIC21.11■□□□□ 0.97
RNF39Q9H2S5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 MTCYBP27-201ENST00000555160 670 ntBASIC21.11■□□□□ 0.97
RNF39Q9H2S5 NAPSB-206ENST00000562112 1266 ntBASIC21.11■□□□□ 0.97
RNF39Q9H2S5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF39Q9H2S5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 Z85996.1-201ENST00000494644 937 ntBASIC21.1■□□□□ 0.97
RNF39Q9H2S5 AC097488.1-201ENST00000507834 756 ntBASIC21.1■□□□□ 0.97
RNF39Q9H2S5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 AC011298.2-201ENST00000617989 482 ntBASIC21.1■□□□□ 0.97
RNF39Q9H2S5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms