Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 AC246785.2-201ENST00000432512 513 ntBASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 AC111152.3-201ENST00000569699 673 ntBASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 RN7SL510P-201ENST00000581311 263 ntBASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 AC079602.3-201ENST00000623931 403 ntBASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDH11YQ9BZA8 AL162741.1-201ENST00000565563 1558 ntBASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 AC093525.10-201ENST00000625130 1569 ntBASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 HLA-F-220ENST00000434407 884 ntBASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 GRAMD4P1-201ENST00000435181 1110 ntBASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH11YQ9BZA8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 KRT8P3-201ENST00000519669 1449 ntBASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH11YQ9BZA8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 KRT8P26-201ENST00000534154 1276 ntBASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 AP002414.4-201ENST00000589764 1148 ntBASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 AL157888.1-201ENST00000631930 593 ntBASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PCDH11YQ9BZA8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms