Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 AC091874.3-201ENST00000512672 1195 ntBASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
THUMPD3Q9BV44 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
THUMPD3Q9BV44 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.27■□□□□ 0.51
THUMPD3Q9BV44 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
THUMPD3Q9BV44 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
THUMPD3Q9BV44 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
THUMPD3Q9BV44 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.27■□□□□ 0.51
THUMPD3Q9BV44 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
THUMPD3Q9BV44 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD3Q9BV44 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 AC097658.1-201ENST00000475555 843 ntBASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD3Q9BV44 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 HLA-L-209ENST00000420110 1011 ntBASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 AC098934.4-201ENST00000564127 592 ntBASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD3Q9BV44 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms