Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.15■□□□□ 0.5
CGREF1Q99674 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.15■□□□□ 0.5
CGREF1Q99674 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CGREF1Q99674 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.15■□□□□ 0.5
CGREF1Q99674 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.15■□□□□ 0.5
CGREF1Q99674 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.15■□□□□ 0.5
CGREF1Q99674 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CGREF1Q99674 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.15■□□□□ 0.5
CGREF1Q99674 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.15■□□□□ 0.5
CGREF1Q99674 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.15■□□□□ 0.5
CGREF1Q99674 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.15■□□□□ 0.5
CGREF1Q99674 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CGREF1Q99674 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGREF1Q99674 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CGREF1Q99674 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CGREF1Q99674 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CGREF1Q99674 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CGREF1Q99674 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CGREF1Q99674 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.14■□□□□ 0.49
CGREF1Q99674 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.14■□□□□ 0.49
CGREF1Q99674 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.14■□□□□ 0.49
CGREF1Q99674 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.14■□□□□ 0.49
CGREF1Q99674 RARRES2P6-201ENST00000567333 442 ntBASIC18.14■□□□□ 0.49
CGREF1Q99674 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.14■□□□□ 0.49
CGREF1Q99674 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.14■□□□□ 0.49
CGREF1Q99674 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.14■□□□□ 0.49
CGREF1Q99674 AL121906.2-201ENST00000621597 723 ntBASIC18.14■□□□□ 0.49
CGREF1Q99674 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.14■□□□□ 0.49
CGREF1Q99674 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CGREF1Q99674 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CGREF1Q99674 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CGREF1Q99674 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.14■□□□□ 0.49
CGREF1Q99674 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 AL354751.1-201ENST00000412768 1863 ntBASIC18.14■□□□□ 0.49
CGREF1Q99674 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 AC018470.1-201ENST00000624790 3129 ntBASIC18.14■□□□□ 0.49
CGREF1Q99674 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGREF1Q99674 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.13■□□□□ 0.49
CGREF1Q99674 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CGREF1Q99674 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.13■□□□□ 0.49
CGREF1Q99674 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.13■□□□□ 0.49
CGREF1Q99674 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CGREF1Q99674 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.13■□□□□ 0.49
CGREF1Q99674 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CGREF1Q99674 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.13■□□□□ 0.49
CGREF1Q99674 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.13■□□□□ 0.49
CGREF1Q99674 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.13■□□□□ 0.49
CGREF1Q99674 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CGREF1Q99674 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.13■□□□□ 0.49
CGREF1Q99674 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.13■□□□□ 0.49
CGREF1Q99674 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CGREF1Q99674 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.13■□□□□ 0.49
CGREF1Q99674 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.13■□□□□ 0.49
CGREF1Q99674 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.13■□□□□ 0.49
CGREF1Q99674 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGREF1Q99674 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CGREF1Q99674 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGREF1Q99674 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGREF1Q99674 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGREF1Q99674 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGREF1Q99674 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms