Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM43Q96BQ3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 MIR3917-201ENST00000580971 93 ntBASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 AC117500.6-201ENST00000624871 588 ntBASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 AF228730.7-201ENST00000641842 219 ntBASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM43Q96BQ3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 MIR574-201ENST00000385209 96 ntBASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM43Q96BQ3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 AC104417.2-201ENST00000562989 1793 ntBASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 AKR1C7P-201ENST00000305623 895 ntBASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 KRT18P13-201ENST00000400056 1290 ntBASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 AC074051.2-201ENST00000565115 352 ntBASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 MIR3180-5-201ENST00000583743 153 ntBASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 Z83836.1-201ENST00000624605 1642 ntBASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms