Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 PRORSD1P-201ENST00000295112 541 ntBASIC18.38■□□□□ 0.53
UBE2E3Q969T4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.38■□□□□ 0.53
UBE2E3Q969T4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 Z85996.1-201ENST00000494644 937 ntBASIC18.38■□□□□ 0.53
UBE2E3Q969T4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 AC142381.4-202ENST00000563973 229 ntBASIC18.38■□□□□ 0.53
UBE2E3Q969T4 AC026271.3-201ENST00000571884 352 ntBASIC18.38■□□□□ 0.53
UBE2E3Q969T4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 AC004980.1-204ENST00000429707 299 ntBASIC18.37■□□□□ 0.53
UBE2E3Q969T4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 UBE2SP1-201ENST00000450587 669 ntBASIC18.37■□□□□ 0.53
UBE2E3Q969T4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 AF186192.3-201ENST00000583427 947 ntBASIC18.37■□□□□ 0.53
UBE2E3Q969T4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 AL031985.4-201ENST00000642138 673 ntBASIC18.37■□□□□ 0.53
UBE2E3Q969T4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 KRT8P41-201ENST00000533985 1514 ntBASIC18.37■□□□□ 0.53
UBE2E3Q969T4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBE2E3Q969T4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 RPS2P4-201ENST00000476944 856 ntBASIC18.36■□□□□ 0.53
UBE2E3Q969T4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE2E3Q969T4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms