Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 AC092119.3-201ENST00000612618 583 ntBASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RAPGEF4Q8WZA2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 TCF3P1-201ENST00000423021 1937 ntBASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RAPGEF4Q8WZA2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RAPGEF4Q8WZA2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC25.03■■□□□ 1.6
RAPGEF4Q8WZA2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.02■■□□□ 1.6
RAPGEF4Q8WZA2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 MIR3180-5-201ENST00000583743 153 ntBASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RAPGEF4Q8WZA2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms