Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.27■□□□□ 0.36
CHD6Q8TD26 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.27■□□□□ 0.36
CHD6Q8TD26 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHD6Q8TD26 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD6Q8TD26 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD6Q8TD26 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHD6Q8TD26 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD6Q8TD26 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHD6Q8TD26 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.27■□□□□ 0.36
CHD6Q8TD26 ALG1L5P-201ENST00000482043 771 ntBASIC17.27■□□□□ 0.36
CHD6Q8TD26 AC027612.4-201ENST00000605371 583 ntBASIC17.27■□□□□ 0.36
CHD6Q8TD26 KRT8P17-201ENST00000453110 1448 ntBASIC17.27■□□□□ 0.36
CHD6Q8TD26 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CHD6Q8TD26 OR8S1-201ENST00000310194 1080 ntBASIC17.27■□□□□ 0.35
CHD6Q8TD26 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD6Q8TD26 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD6Q8TD26 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.27■□□□□ 0.35
CHD6Q8TD26 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.27■□□□□ 0.35
CHD6Q8TD26 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.27■□□□□ 0.35
CHD6Q8TD26 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.27■□□□□ 0.35
CHD6Q8TD26 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHD6Q8TD26 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD6Q8TD26 AC008608.2-201ENST00000606089 416 ntBASIC17.27■□□□□ 0.35
CHD6Q8TD26 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD6Q8TD26 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD6Q8TD26 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD6Q8TD26 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD6Q8TD26 KRT18P23-201ENST00000435622 1283 ntBASIC17.26■□□□□ 0.35
CHD6Q8TD26 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.26■□□□□ 0.35
CHD6Q8TD26 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD6Q8TD26 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CHD6Q8TD26 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.26■□□□□ 0.35
CHD6Q8TD26 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD6Q8TD26 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.26■□□□□ 0.35
CHD6Q8TD26 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
CHD6Q8TD26 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHD6Q8TD26 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD6Q8TD26 KRT8P3-201ENST00000519669 1449 ntBASIC17.26■□□□□ 0.35
CHD6Q8TD26 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CHD6Q8TD26 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.26■□□□□ 0.35
CHD6Q8TD26 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD6Q8TD26 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD6Q8TD26 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD6Q8TD26 RBM17P3-201ENST00000417687 1192 ntBASIC17.25■□□□□ 0.35
CHD6Q8TD26 AC007967.2-201ENST00000432613 625 ntBASIC17.25■□□□□ 0.35
CHD6Q8TD26 PRSS29P-201ENST00000440800 595 ntBASIC17.25■□□□□ 0.35
CHD6Q8TD26 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 AC132008.2-207ENST00000454517 770 ntBASIC17.25■□□□□ 0.35
CHD6Q8TD26 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 MIR5100-201ENST00000579544 119 ntBASIC17.25■□□□□ 0.35
CHD6Q8TD26 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD6Q8TD26 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD6Q8TD26 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHD6Q8TD26 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHD6Q8TD26 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHD6Q8TD26 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.25■□□□□ 0.35
CHD6Q8TD26 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD6Q8TD26 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD6Q8TD26 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD6Q8TD26 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD6Q8TD26 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD6Q8TD26 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD6Q8TD26 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD6Q8TD26 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CHD6Q8TD26 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD6Q8TD26 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD6Q8TD26 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD6Q8TD26 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD6Q8TD26 AL592071.1-201ENST00000611956 408 ntBASIC17.24■□□□□ 0.35
CHD6Q8TD26 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD6Q8TD26 TMEM179-206ENST00000616017 1645 ntBASIC17.24■□□□□ 0.35
CHD6Q8TD26 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD6Q8TD26 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD6Q8TD26 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD6Q8TD26 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD6Q8TD26 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD6Q8TD26 AL139400.1-201ENST00000366220 510 ntBASIC17.23■□□□□ 0.35
CHD6Q8TD26 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD6Q8TD26 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD6Q8TD26 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD6Q8TD26 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD6Q8TD26 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms