Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC39CQ8N584 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.35■□□□□ 0.85
TTC39CQ8N584 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39CQ8N584 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39CQ8N584 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39CQ8N584 IRX1P1-201ENST00000438849 1838 ntBASIC20.34■□□□□ 0.85
TTC39CQ8N584 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.34■□□□□ 0.85
TTC39CQ8N584 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.34■□□□□ 0.85
TTC39CQ8N584 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
TTC39CQ8N584 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 CA15P1-201ENST00000481698 905 ntBASIC20.34■□□□□ 0.85
TTC39CQ8N584 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.34■□□□□ 0.85
TTC39CQ8N584 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.34■□□□□ 0.85
TTC39CQ8N584 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.34■□□□□ 0.85
TTC39CQ8N584 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
TTC39CQ8N584 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39CQ8N584 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39CQ8N584 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39CQ8N584 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
TTC39CQ8N584 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39CQ8N584 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC39CQ8N584 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.33■□□□□ 0.85
TTC39CQ8N584 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39CQ8N584 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
TTC39CQ8N584 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC39CQ8N584 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39CQ8N584 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC39CQ8N584 MFAP1P1-201ENST00000442257 1255 ntBASIC20.33■□□□□ 0.85
TTC39CQ8N584 AL355075.4-201ENST00000554988 638 ntBASIC20.33■□□□□ 0.85
TTC39CQ8N584 FITM1-202ENST00000559294 800 ntBASIC20.33■□□□□ 0.85
TTC39CQ8N584 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC39CQ8N584 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC39CQ8N584 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
TTC39CQ8N584 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.33■□□□□ 0.84
TTC39CQ8N584 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.33■□□□□ 0.84
TTC39CQ8N584 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TTC39CQ8N584 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC39CQ8N584 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TTC39CQ8N584 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39CQ8N584 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39CQ8N584 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39CQ8N584 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39CQ8N584 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39CQ8N584 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39CQ8N584 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.32■□□□□ 0.84
TTC39CQ8N584 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TTC39CQ8N584 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.32■□□□□ 0.84
TTC39CQ8N584 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.32■□□□□ 0.84
TTC39CQ8N584 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39CQ8N584 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.32■□□□□ 0.84
TTC39CQ8N584 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.32■□□□□ 0.84
TTC39CQ8N584 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39CQ8N584 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 CRYGFP-201ENST00000418459 633 ntBASIC20.31■□□□□ 0.84
TTC39CQ8N584 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.31■□□□□ 0.84
TTC39CQ8N584 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39CQ8N584 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms